RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 GIT2Q14161 759 aa27.25■■□□□ 1.95
CDC42EP4-205ENST00000580315 FOXD4L6Q3SYB3 417 aaPredicted RBP27.25■■□□□ 1.95
CDC42EP4-205ENST00000580315 FOXD4L3Q6VB84 417 aaPredicted RBP27.25■■□□□ 1.95
CDC42EP4-205ENST00000580315 TAS1R3Q7RTX0 852 aa27.25■■□□□ 1.95
CDC42EP4-205ENST00000580315 COLGALT2Q8IYK4 626 aa27.25■■□□□ 1.95
CDC42EP4-205ENST00000580315 MYCT1Q8N699 235 aa27.25■■□□□ 1.95
CDC42EP4-205ENST00000580315 AUTS2Q8WXX7 1259 aa27.25■■□□□ 1.95
CDC42EP4-205ENST00000580315 TCHPQ9BT92 498 aa27.25■■□□□ 1.95
CDC42EP4-205ENST00000580315 TARS2Q9BW92 718 aaKnown RBP27.25■■□□□ 1.95
CDC42EP4-205ENST00000580315 MIOSQ9NXC5 875 aa27.25■■□□□ 1.95
CDC42EP4-205ENST00000580315 SORCS3Q9UPU3 1222 aa27.25■■□□□ 1.95
CDC42EP4-205ENST00000580315 IRAK3Q9Y616 596 aa27.25■■□□□ 1.95
CDC42EP4-205ENST00000580315 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 NRP1O14786 923 aa27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 RECQL4O94761 1208 aa27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 WEE2P0C1S8 567 aa27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 MTHFRP42898 656 aa27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 OR1G1P47890 313 aa27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 NCKAP1LP55160 1127 aa27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 DSC1Q08554 894 aa27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 MTMR3Q13615 1198 aa27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 BECN1Q14457 450 aa27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 ZNF568Q3ZCX4 644 aa27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 SV2BQ7L1I2 683 aa27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 C12orf76Q8N812 135 aaPredicted RBP27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 ZHX3Q9H4I2 956 aa27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 GDAQ9Y2T3 454 aa27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 ZFHX2Q9C0A1 2572 aaPredicted RBP27.24■■□□□ 1.95
CDC42EP4-205ENST00000580315 BRD1O95696 1058 aa27.23■■□□□ 1.95
CDC42EP4-205ENST00000580315 CTSAP10619 480 aa27.23■■□□□ 1.95
CDC42EP4-205ENST00000580315 STAT6P42226 847 aa27.23■■□□□ 1.95
CDC42EP4-205ENST00000580315 ZNF131P52739 623 aa27.23■■□□□ 1.95
CDC42EP4-205ENST00000580315 PKP1Q13835 747 aa27.23■■□□□ 1.95
CDC42EP4-205ENST00000580315 RARS2Q5T160 578 aaKnown RBP27.23■■□□□ 1.95
CDC42EP4-205ENST00000580315 HAUS6Q7Z4H7 955 aa27.23■■□□□ 1.95
CDC42EP4-205ENST00000580315 UBALD2Q8IYN6 164 aa27.23■■□□□ 1.95
CDC42EP4-205ENST00000580315 GSTCDQ8NEC7 633 aa27.23■■□□□ 1.95
CDC42EP4-205ENST00000580315 KCNG4Q8TDN1 519 aa27.23■■□□□ 1.95
CDC42EP4-205ENST00000580315 BCL7CQ8WUZ0 217 aaPredicted RBP27.23■■□□□ 1.95
CDC42EP4-205ENST00000580315 FAM86C1Q9NVL1 165 aa27.23■■□□□ 1.95
CDC42EP4-205ENST00000580315 CFAP45Q9UL16 551 aa27.23■■□□□ 1.95
CDC42EP4-205ENST00000580315 PRG3Q9Y2Y8 225 aaPredicted RBP27.23■■□□□ 1.95
CDC42EP4-205ENST00000580315 CUTAO60888 179 aa27.22■■□□□ 1.95
CDC42EP4-205ENST00000580315 ABCD1P33897 745 aa27.22■■□□□ 1.95
CDC42EP4-205ENST00000580315 KANK3Q6NY19 840 aa27.22■■□□□ 1.95
CDC42EP4-205ENST00000580315 MPZL3Q6UWV2 235 aa27.22■■□□□ 1.95
CDC42EP4-205ENST00000580315 TMEM87AQ8NBN3 555 aa27.22■■□□□ 1.95
CDC42EP4-205ENST00000580315 CCDC94Q9BW85 323 aaPredicted RBP27.22■■□□□ 1.95
CDC42EP4-205ENST00000580315 COLEC11Q9BWP8 271 aa27.22■■□□□ 1.95
CDC42EP4-205ENST00000580315 IRF2BPLQ9H1B7 796 aa27.22■■□□□ 1.95
CDC42EP4-205ENST00000580315 CDT1Q9H211 546 aa27.22■■□□□ 1.95
CDC42EP4-205ENST00000580315 PTPRHQ9HD43 1115 aa27.22■■□□□ 1.95
CDC42EP4-205ENST00000580315 DZANK1Q9NVP4 752 aa27.22■■□□□ 1.95
CDC42EP4-205ENST00000580315 K7ENM7 598 aa27.21■■□□□ 1.95
CDC42EP4-205ENST00000580315 TRAK2O60296 914 aa27.21■■□□□ 1.95
CDC42EP4-205ENST00000580315 MCF2P10911 925 aa27.21■■□□□ 1.95
CDC42EP4-205ENST00000580315 EPCAMP16422 314 aa27.21■■□□□ 1.95
CDC42EP4-205ENST00000580315 YARSP54577 528 aaKnown RBP27.21■■□□□ 1.95
CDC42EP4-205ENST00000580315 ZPBP2Q6X784 338 aa27.21■■□□□ 1.95
CDC42EP4-205ENST00000580315 SLC22A17Q8WUG5 538 aa27.21■■□□□ 1.95
CDC42EP4-205ENST00000580315 PANK2Q9BZ23 570 aa27.21■■□□□ 1.95
CDC42EP4-205ENST00000580315 TOM1L1O75674 476 aa27.2■■□□□ 1.94
CDC42EP4-205ENST00000580315 THP07101 528 aa27.2■■□□□ 1.94
CDC42EP4-205ENST00000580315 GRM5P41594 1212 aa27.2■■□□□ 1.94
CDC42EP4-205ENST00000580315 NUBP1P53384 320 aa27.2■■□□□ 1.94
CDC42EP4-205ENST00000580315 ATAT1Q5SQI0 421 aa27.2■■□□□ 1.94
CDC42EP4-205ENST00000580315 KIAA1841Q6NSI8 718 aa27.2■■□□□ 1.94
CDC42EP4-205ENST00000580315 KCNN1Q92952 543 aa27.2■■□□□ 1.94
CDC42EP4-205ENST00000580315 BICD1Q96G01 975 aa27.2■■□□□ 1.94
CDC42EP4-205ENST00000580315 SMOC2Q9H3U7 446 aa27.2■■□□□ 1.94
CDC42EP4-205ENST00000580315 TOPORSQ9NS56 1045 aaPredicted RBP27.2■■□□□ 1.94
CDC42EP4-205ENST00000580315 PROZP22891 400 aa27.19■■□□□ 1.94
CDC42EP4-205ENST00000580315 TUSC3Q13454 348 aa27.19■■□□□ 1.94
CDC42EP4-205ENST00000580315 DYMQ7RTS9 669 aa27.19■■□□□ 1.94
CDC42EP4-205ENST00000580315 ZDHHC14Q8IZN3 488 aa27.19■■□□□ 1.94
CDC42EP4-205ENST00000580315 PDILTQ8N807 584 aa27.19■■□□□ 1.94
CDC42EP4-205ENST00000580315 ATOH1Q92858 354 aaPredicted RBP27.19■■□□□ 1.94
CDC42EP4-205ENST00000580315 VN1R3Q9BXE9 311 aa27.19■■□□□ 1.94
CDC42EP4-205ENST00000580315 ANKFY1Q9P2R3 1169 aa27.19■■□□□ 1.94
CDC42EP4-205ENST00000580315 PTGESO14684 152 aa27.18■■□□□ 1.94
CDC42EP4-205ENST00000580315 ASGR2P07307 311 aa27.18■■□□□ 1.94
CDC42EP4-205ENST00000580315 MATR3P43243 847 aaKnown RBP eCLIP27.18■■□□□ 1.94
CDC42EP4-205ENST00000580315 ME1P48163 572 aa27.18■■□□□ 1.94
CDC42EP4-205ENST00000580315 TDRD5Q8NAT2 981 aaKnown RBP27.18■■□□□ 1.94
CDC42EP4-205ENST00000580315 DDX12PQ92771 950 aa27.18■■□□□ 1.94
CDC42EP4-205ENST00000580315 MARCH5Q9NX47 278 aa27.18■■□□□ 1.94
CDC42EP4-205ENST00000580315 LIMD1Q9UGP4 676 aa27.18■■□□□ 1.94
CDC42EP4-205ENST00000580315 TBX20Q9UMR3 447 aa27.18■■□□□ 1.94
CDC42EP4-205ENST00000580315 USTQ9Y2C2 406 aa27.18■■□□□ 1.94
CDC42EP4-205ENST00000580315 CFAP54Q96N23 3096 aa27.18■■□□□ 1.94
CDC42EP4-205ENST00000580315 MYO10Q9HD67 2058 aa27.18■■□□□ 1.94
CDC42EP4-205ENST00000580315 H0Y858 1186 aa27.17■■□□□ 1.94
CDC42EP4-205ENST00000580315 CLDN3O15551 220 aa27.17■■□□□ 1.94
CDC42EP4-205ENST00000580315 GFRA3O60609 400 aa27.17■■□□□ 1.94
CDC42EP4-205ENST00000580315 HARSP12081 509 aaKnown RBP27.17■■□□□ 1.94
CDC42EP4-205ENST00000580315 OSTNP61366 133 aa27.17■■□□□ 1.94
CDC42EP4-205ENST00000580315 DNM1Q05193 864 aaKnown RBP27.17■■□□□ 1.94
CDC42EP4-205ENST00000580315 NOLC1Q14978 699 aaKnown RBP eCLIP27.17■■□□□ 1.94
CDC42EP4-205ENST00000580315 PTPN14Q15678 1187 aa27.17■■□□□ 1.94
CDC42EP4-205ENST00000580315 ACAP3Q96P50 834 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms