RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 TSHZ2Q9NRE2 1034 aa15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 SLC38A7Q9NVC3 462 aa15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 SNTG2Q9NY99 539 aa15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 RIF1Q5UIP0 2472 aaKnown RBP15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 PDCD11Q14690 1871 aaKnown RBP15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 CCDC195A0A1B0GUA6 201 aa15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 H0YCG3 227 aa15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 TGM5O43548 720 aa15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 TRAPPC3O43617 180 aa15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 SSBP05455 408 aaKnown RBP eCLIP15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 MCF2P10911 925 aa15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 ABCD1P33897 745 aa15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 CLCN5P51795 746 aa15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 MAPK7Q13164 816 aa15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 NBR1Q14596 966 aa15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 CDR2LQ86X02 465 aaPredicted RBP15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 SYT2Q8N9I0 419 aaPredicted RBP15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 ZNF707Q96C28 371 aaPredicted RBP15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 TSPAN18Q96SJ8 248 aa15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 KLK14Q9P0G3 267 aa15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 CLUHO75153 1309 aa15.93■□□□□ 0.14
SMARCE1-213ENST00000578044 DOCK6Q96HP0 2047 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 SPDYE4A6NLX3 237 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 C2CD2LO14523 706 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 ZMYND10O75800 440 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 KIF4AO95239 1232 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 EDN1P05305 212 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 KCNE1P15382 129 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 FGFR3P22607 806 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 AVPR2P30518 371 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 SMTNP53814 917 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 TDGQ13569 410 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 UPP1Q16831 310 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 TMEM132AQ24JP5 1023 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 EEF1DP3Q658K8 133 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 ZPBP2Q6X784 338 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 BRAPQ7Z569 592 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 LNX1Q8TBB1 728 aaPredicted RBP15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 RIN2Q8WYP3 895 aaPredicted RBP15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 TBC1D32Q96NH3 1257 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 CCDC94Q9BW85 323 aaPredicted RBP15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 KMT5AQ9NQR1 393 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 LIMD1Q9UGP4 676 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 CDH22Q9UJ99 828 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 FBXW11Q9UKB1 542 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 DUSP12Q9UNI6 340 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 BACE2Q9Y5Z0 518 aa15.92■□□□□ 0.14
SMARCE1-213ENST00000578044 USP34Q70CQ2 3546 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 E9PMD0 336 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 F8W810 466 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 H3BQV1 296 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 ABLIM1O14639 778 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 HIP1RO75146 1068 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 PLS3P13797 630 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 GJB2P29033 226 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 RPL9P32969 192 aaKnown RBP15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 YARSP54577 528 aaKnown RBP15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 PEX3P56589 373 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 RAB33AQ14088 237 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 KYAT1Q16773 422 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 RTP2Q5QGT7 225 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 CLSTN3Q9BQT9 956 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 PAAF1Q9BRP4 392 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 CDT1Q9H211 546 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 ODF2LQ9ULJ1 636 aa15.91■□□□□ 0.14
SMARCE1-213ENST00000578044 PTPRZ1P23471 2315 aaPredicted RBP15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 FAM186AA6NE01 2351 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 SMIM28A0A1B0GU29 152 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 TOM1L1O75674 476 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 WEE2P0C1S8 567 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 SLC12A3P55017 1021 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 TMEM119Q4V9L6 283 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 FAM171A1Q5VUB5 890 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 MCTP1Q6DN14 999 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 KANK3Q6NY19 840 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 MPZL3Q6UWV2 235 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 ANKS3Q6ZW76 656 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 TAS1R3Q7RTX0 852 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 SMG7Q92540 1137 aaKnown RBP15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 KIFC3Q9BVG8 833 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 RUSC1Q9BVN2 902 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 PLEKHA5Q9HAU0 1116 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 KCNK12Q9HB15 430 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 CNTN3Q9P232 1028 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 LARSQ9P2J5 1176 aaKnown RBP15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 MTRRQ9UBK8 725 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 WNT16Q9UBV4 365 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 MAFFQ9ULX9 164 aa15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 MORC2Q9Y6X9 1032 aaPredicted RBP15.9■□□□□ 0.14
SMARCE1-213ENST00000578044 CASTOR2A6NHX0 329 aa15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 CCDC169A6NNP5 214 aa15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 ANHXE9PGG2 379 aa15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 SYN3O14994 580 aa15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 B3GAT3O94766 335 aa15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 PDCP20941 246 aa15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 CUL4AQ13619 759 aa15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 PSMD5Q16401 504 aa15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 ZNF568Q3ZCX4 644 aa15.89■□□□□ 0.13
SMARCE1-213ENST00000578044 KCNK18Q7Z418 384 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms