RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-231	ENST00000574875	NAB2	Q15742	525 aa		21.33	■■□□□ 1.01
ABR-231	ENST00000574875	RARS2	Q5T160	578 aa	Known RBP	21.33	■■□□□ 1.01
ABR-231	ENST00000574875	USP49	Q70CQ1	688 aa		21.33	■■□□□ 1.01
ABR-231	ENST00000574875	ZBTB45	Q96K62	511 aa	Predicted RBP	21.33	■■□□□ 1.01
ABR-231	ENST00000574875	REEP2	Q9BRK0	252 aa		21.33	■■□□□ 1.01
ABR-231	ENST00000574875	RXFP1	Q9HBX9	757 aa		21.33	■■□□□ 1.01
ABR-231	ENST00000574875	CCDC39	Q9UFE4	941 aa		21.33	■■□□□ 1.01
ABR-231	ENST00000574875		H0YCG3	227 aa		21.32	■■□□□ 1
ABR-231	ENST00000574875	DCX	O43602	365 aa		21.32	■■□□□ 1
ABR-231	ENST00000574875	KRT18	P05783	430 aa	Known RBP	21.32	■■□□□ 1
ABR-231	ENST00000574875	TMEM31	Q5JXX7	168 aa		21.32	■■□□□ 1
ABR-231	ENST00000574875	KANK3	Q6NY19	840 aa		21.32	■■□□□ 1
ABR-231	ENST00000574875	MPZL3	Q6UWV2	235 aa		21.32	■■□□□ 1
ABR-231	ENST00000574875	HAUS6	Q7Z4H7	955 aa		21.32	■■□□□ 1
ABR-231	ENST00000574875	MYCT1	Q8N699	235 aa		21.32	■■□□□ 1
ABR-231	ENST00000574875	CEP120	Q8N960	986 aa		21.32	■■□□□ 1
ABR-231	ENST00000574875	LARP4B	Q92615	738 aa	Known RBP	21.32	■■□□□ 1
ABR-231	ENST00000574875	B3GALT6	Q96L58	329 aa		21.32	■■□□□ 1
ABR-231	ENST00000574875	FBXL18	Q96ME1	805 aa		21.32	■■□□□ 1
ABR-231	ENST00000574875	CLIC6	Q96NY7	704 aa		21.32	■■□□□ 1
ABR-231	ENST00000574875	ACAP3	Q96P50	834 aa		21.32	■■□□□ 1
ABR-231	ENST00000574875	USP28	Q96RU2	1077 aa		21.32	■■□□□ 1
ABR-231	ENST00000574875	ABLIM1	O14639	778 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	TEX28	O15482	410 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	GPR37L1	O60883	481 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	FAM13A	O94988	1023 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	ADH1A	P07327	375 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	MTHFR	P42898	656 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	NCKAP1L	P55160	1127 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	SLC39A14	Q15043	492 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	GLRA4	Q5JXX5	417 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	ATAT1	Q5SQI0	421 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	ALKAL1	Q6UXT8	129 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	GPR65	Q8IYL9	337 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	RIPOR3	Q96MK2	946 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	NECTIN4	Q96NY8	510 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	PPP1R10	Q96QC0	940 aa	Known RBP	21.31	■■□□□ 1
ABR-231	ENST00000574875	LRFN3	Q9BTN0	628 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	PARVG	Q9HBI0	331 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	TOPORS	Q9NS56	1045 aa	Predicted RBP	21.31	■■□□□ 1
ABR-231	ENST00000574875	CDH22	Q9UJ99	828 aa		21.31	■■□□□ 1
ABR-231	ENST00000574875	SF3B1	O75533	1304 aa	Known RBP eCLIP	21.3	■■□□□ 1
ABR-231	ENST00000574875	SMIM28	A0A1B0GU29	152 aa		21.3	■■□□□ 1
ABR-231	ENST00000574875	SPDYE4	A6NLX3	237 aa		21.3	■■□□□ 1
ABR-231	ENST00000574875	TOM1L1	O75674	476 aa		21.3	■■□□□ 1
ABR-231	ENST00000574875	XKR4	Q5GH76	650 aa		21.3	■■□□□ 1
ABR-231	ENST00000574875	DCLRE1A	Q6PJP8	1040 aa		21.3	■■□□□ 1
ABR-231	ENST00000574875	ZPBP2	Q6X784	338 aa		21.3	■■□□□ 1
ABR-231	ENST00000574875	HASPIN	Q8TF76	798 aa		21.3	■■□□□ 1
ABR-231	ENST00000574875	RIN2	Q8WYP3	895 aa	Predicted RBP	21.3	■■□□□ 1
ABR-231	ENST00000574875	ZHX3	Q9H4I2	956 aa		21.3	■■□□□ 1
ABR-231	ENST00000574875	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	21.3	■■□□□ 1
ABR-231	ENST00000574875	MORC2	Q9Y6X9	1032 aa	Predicted RBP	21.3	■■□□□ 1
ABR-231	ENST00000574875	CLDN3	O15551	220 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	TRAK2	O60296	914 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	KIF4A	O95239	1232 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	F13A1	P00488	732 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	WEE2	P0C1S8	567 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	HARS	P12081	509 aa	Known RBP	21.29	■■□□□ 1
ABR-231	ENST00000574875	SCP2	P22307	547 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	TXLNA	P40222	546 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	ZNF131	P52739	623 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	HERC4	Q5GLZ8	1057 aa	Predicted RBP	21.29	■■□□□ 1
ABR-231	ENST00000574875	FAM171A1	Q5VUB5	890 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	RRAGB	Q5VZM2	374 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	TMC5	Q6UXY8	1006 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	KCNN1	Q92952	543 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	C11orf16	Q9NQ32	467 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	FNIP2	Q9P278	1114 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	DPP7	Q9UHL4	492 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	MUTYH	Q9UIF7	546 aa		21.29	■■□□□ 1
ABR-231	ENST00000574875	FAM86C2P	A6NEL3	165 aa		21.28	■■□□□ 1
ABR-231	ENST00000574875	GLUD1	P00367	558 aa		21.28	■■□□□ 1
ABR-231	ENST00000574875	COL9A1	P20849	921 aa		21.28	■■□□□ 1
ABR-231	ENST00000574875	MATR3	P43243	847 aa	Known RBP eCLIP	21.28	■■□□□ 1
ABR-231	ENST00000574875	ELAVL2	Q12926	359 aa	Known RBP	21.28	■■□□□ 1
ABR-231	ENST00000574875	CEP57	Q86XR8	500 aa		21.28	■■□□□ 1
ABR-231	ENST00000574875	PALB2	Q86YC2	1186 aa		21.28	■■□□□ 1
ABR-231	ENST00000574875	KRI1	Q8N9T8	703 aa	Known RBP	21.28	■■□□□ 1
ABR-231	ENST00000574875	BICD1	Q96G01	975 aa		21.28	■■□□□ 1
ABR-231	ENST00000574875	UROC1	Q96N76	676 aa		21.28	■■□□□ 1
ABR-231	ENST00000574875	TTPAL	Q9BTX7	342 aa		21.28	■■□□□ 1
ABR-231	ENST00000574875	POMK	Q9H5K3	350 aa		21.28	■■□□□ 1
ABR-231	ENST00000574875	SFXN1	Q9H9B4	322 aa		21.28	■■□□□ 1
ABR-231	ENST00000574875	SLC38A7	Q9NVC3	462 aa		21.28	■■□□□ 1
ABR-231	ENST00000574875	ANKFY1	Q9P2R3	1169 aa		21.28	■■□□□ 1
ABR-231	ENST00000574875	STK17A	Q9UEE5	414 aa		21.28	■■□□□ 1
ABR-231	ENST00000574875	TBX20	Q9UMR3	447 aa		21.28	■■□□□ 1
ABR-231	ENST00000574875	NR2E1	Q9Y466	385 aa		21.28	■■□□□ 1
ABR-231	ENST00000574875	TBCA	O75347	108 aa	Known RBP	21.27	■■□□□ 1
ABR-231	ENST00000574875	B3GAT3	O94766	335 aa		21.27	■■□□□ 1
ABR-231	ENST00000574875	C1R	P00736	705 aa		21.27	■■□□□ 1
ABR-231	ENST00000574875	KCNE1	P15382	129 aa		21.27	■■□□□ 1
ABR-231	ENST00000574875	NASP	P49321	788 aa	Predicted RBP	21.27	■■□□□ 1
ABR-231	ENST00000574875	CLCNKB	P51801	687 aa		21.27	■■□□□ 1
ABR-231	ENST00000574875	CREM	Q03060	361 aa		21.27	■■□□□ 1
ABR-231	ENST00000574875	MCL1	Q07820	350 aa		21.27	■■□□□ 1
ABR-231	ENST00000574875	NOLC1	Q14978	699 aa	Known RBP eCLIP	21.27	■■□□□ 1
ABR-231	ENST00000574875	STK38	Q15208	465 aa		21.27	■■□□□ 1
ABR-231	ENST00000574875	RTP2	Q5QGT7	225 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms