RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 SMIM28A0A1B0GU29 152 aa21.59■■□□□ 1.05
SCARF1-208ENST00000574545 KIF4AO95239 1232 aa21.59■■□□□ 1.05
SCARF1-208ENST00000574545 C1RP00736 705 aa21.59■■□□□ 1.05
SCARF1-208ENST00000574545 COL9A1P20849 921 aa21.59■■□□□ 1.05
SCARF1-208ENST00000574545 IGFBP6P24592 240 aaPredicted RBP21.59■■□□□ 1.05
SCARF1-208ENST00000574545 GLRA4Q5JXX5 417 aa21.59■■□□□ 1.05
SCARF1-208ENST00000574545 RARS2Q5T160 578 aaKnown RBP21.59■■□□□ 1.05
SCARF1-208ENST00000574545 CES5AQ6NT32 575 aa21.59■■□□□ 1.05
SCARF1-208ENST00000574545 CLIC6Q96NY7 704 aa21.59■■□□□ 1.05
SCARF1-208ENST00000574545 NECTIN4Q96NY8 510 aa21.59■■□□□ 1.05
SCARF1-208ENST00000574545 POMKQ9H5K3 350 aa21.59■■□□□ 1.05
SCARF1-208ENST00000574545 FNIP2Q9P278 1114 aa21.59■■□□□ 1.05
SCARF1-208ENST00000574545 FAM86C2PA6NEL3 165 aa21.58■■□□□ 1.05
SCARF1-208ENST00000574545 TOM1L1O75674 476 aa21.58■■□□□ 1.05
SCARF1-208ENST00000574545 PAPLNO95428 1278 aa21.58■■□□□ 1.05
SCARF1-208ENST00000574545 DHX8Q14562 1220 aaKnown RBP21.58■■□□□ 1.05
SCARF1-208ENST00000574545 SLC39A14Q15043 492 aa21.58■■□□□ 1.05
SCARF1-208ENST00000574545 RTP2Q5QGT7 225 aa21.58■■□□□ 1.05
SCARF1-208ENST00000574545 KIAA1841Q6NSI8 718 aa21.58■■□□□ 1.05
SCARF1-208ENST00000574545 ZPBP2Q6X784 338 aa21.58■■□□□ 1.05
SCARF1-208ENST00000574545 HAUS6Q7Z4H7 955 aa21.58■■□□□ 1.05
SCARF1-208ENST00000574545 ZBTB33Q86T24 672 aa21.58■■□□□ 1.05
SCARF1-208ENST00000574545 LARP4BQ92615 738 aaKnown RBP21.58■■□□□ 1.05
SCARF1-208ENST00000574545 ZMAT2Q96NC0 199 aaKnown RBP21.58■■□□□ 1.05
SCARF1-208ENST00000574545 CCDC94Q9BW85 323 aaPredicted RBP21.58■■□□□ 1.05
SCARF1-208ENST00000574545 HAPLN2Q9GZV7 340 aa21.58■■□□□ 1.05
SCARF1-208ENST00000574545 TMEM189-UBE2V1I3L0A0 370 aa21.57■■□□□ 1.04
SCARF1-208ENST00000574545 ADH1AP07327 375 aa21.57■■□□□ 1.04
SCARF1-208ENST00000574545 WEE2P0C1S8 567 aa21.57■■□□□ 1.04
SCARF1-208ENST00000574545 MTHFRP42898 656 aa21.57■■□□□ 1.04
SCARF1-208ENST00000574545 OSTNP61366 133 aa21.57■■□□□ 1.04
SCARF1-208ENST00000574545 CEBPZQ03701 1054 aaKnown RBP21.57■■□□□ 1.04
SCARF1-208ENST00000574545 STRN3Q13033 797 aa21.57■■□□□ 1.04
SCARF1-208ENST00000574545 LILRA6Q6PI73 481 aa21.57■■□□□ 1.04
SCARF1-208ENST00000574545 GPR149Q86SP6 731 aa21.57■■□□□ 1.04
SCARF1-208ENST00000574545 HASPINQ8TF76 798 aa21.57■■□□□ 1.04
SCARF1-208ENST00000574545 SNX27Q96L92 541 aa21.57■■□□□ 1.04
SCARF1-208ENST00000574545 TCHPQ9BT92 498 aa21.57■■□□□ 1.04
SCARF1-208ENST00000574545 SFXN1Q9H9B4 322 aa21.57■■□□□ 1.04
SCARF1-208ENST00000574545 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.57■■□□□ 1.04
SCARF1-208ENST00000574545 TECTAO75443 2155 aa21.57■■□□□ 1.04
SCARF1-208ENST00000574545 SF3B1O75533 1304 aaKnown RBP eCLIP21.56■■□□□ 1.04
SCARF1-208ENST00000574545 KCNE1P15382 129 aa21.56■■□□□ 1.04
SCARF1-208ENST00000574545 NASPP49321 788 aaPredicted RBP21.56■■□□□ 1.04
SCARF1-208ENST00000574545 SOX4Q06945 474 aaPredicted RBP21.56■■□□□ 1.04
SCARF1-208ENST00000574545 MCL1Q07820 350 aa21.56■■□□□ 1.04
SCARF1-208ENST00000574545 UPP1Q16831 310 aa21.56■■□□□ 1.04
SCARF1-208ENST00000574545 ATAT1Q5SQI0 421 aa21.56■■□□□ 1.04
SCARF1-208ENST00000574545 DCLRE1AQ6PJP8 1040 aa21.56■■□□□ 1.04
SCARF1-208ENST00000574545 TMC5Q6UXY8 1006 aa21.56■■□□□ 1.04
SCARF1-208ENST00000574545 CMASQ8NFW8 434 aaPredicted RBP21.56■■□□□ 1.04
SCARF1-208ENST00000574545 LNX1Q8TBB1 728 aaPredicted RBP21.56■■□□□ 1.04
SCARF1-208ENST00000574545 RIN2Q8WYP3 895 aaPredicted RBP21.56■■□□□ 1.04
SCARF1-208ENST00000574545 RIPOR3Q96MK2 946 aa21.56■■□□□ 1.04
SCARF1-208ENST00000574545 ACAP3Q96P50 834 aa21.56■■□□□ 1.04
SCARF1-208ENST00000574545 PARVGQ9HBI0 331 aa21.56■■□□□ 1.04
SCARF1-208ENST00000574545 GOLGA2P5Q9HBQ8 144 aa21.56■■□□□ 1.04
SCARF1-208ENST00000574545 TOPORSQ9NS56 1045 aaPredicted RBP21.56■■□□□ 1.04
SCARF1-208ENST00000574545 CNTN3Q9P232 1028 aa21.56■■□□□ 1.04
SCARF1-208ENST00000574545 RAPGEFL1Q9UHV5 662 aa21.56■■□□□ 1.04
SCARF1-208ENST00000574545 PRR33A8MZF0 331 aa21.55■■□□□ 1.04
SCARF1-208ENST00000574545 H0YCG3 227 aa21.55■■□□□ 1.04
SCARF1-208ENST00000574545 PIGRP01833 764 aa21.55■■□□□ 1.04
SCARF1-208ENST00000574545 CLCNKBP51801 687 aa21.55■■□□□ 1.04
SCARF1-208ENST00000574545 YARSP54577 528 aaKnown RBP21.55■■□□□ 1.04
SCARF1-208ENST00000574545 SLC10A6Q3KNW5 377 aa21.55■■□□□ 1.04
SCARF1-208ENST00000574545 FAM171A1Q5VUB5 890 aa21.55■■□□□ 1.04
SCARF1-208ENST00000574545 MYCT1Q8N699 235 aa21.55■■□□□ 1.04
SCARF1-208ENST00000574545 C3orf58Q8NDZ4 430 aa21.55■■□□□ 1.04
SCARF1-208ENST00000574545 HDAC7Q8WUI4 952 aa21.55■■□□□ 1.04
SCARF1-208ENST00000574545 PIK3R5Q8WYR1 880 aa21.55■■□□□ 1.04
SCARF1-208ENST00000574545 UROC1Q96N76 676 aa21.55■■□□□ 1.04
SCARF1-208ENST00000574545 TTPALQ9BTX7 342 aa21.55■■□□□ 1.04
SCARF1-208ENST00000574545 RHOBTB2Q9BYZ6 727 aa21.55■■□□□ 1.04
SCARF1-208ENST00000574545 MAN1C1Q9NR34 630 aa21.55■■□□□ 1.04
SCARF1-208ENST00000574545 PLXNA3P51805 1871 aa21.55■■□□□ 1.04
SCARF1-208ENST00000574545 CLDN3O15551 220 aa21.54■■□□□ 1.04
SCARF1-208ENST00000574545 TGM5O43548 720 aa21.54■■□□□ 1.04
SCARF1-208ENST00000574545 TRAK2O60296 914 aa21.54■■□□□ 1.04
SCARF1-208ENST00000574545 FAM13AO94988 1023 aa21.54■■□□□ 1.04
SCARF1-208ENST00000574545 GLUD1P00367 558 aa21.54■■□□□ 1.04
SCARF1-208ENST00000574545 RPL17P18621 184 aaKnown RBP21.54■■□□□ 1.04
SCARF1-208ENST00000574545 SCP2P22307 547 aa21.54■■□□□ 1.04
SCARF1-208ENST00000574545 ELAVL2Q12926 359 aaKnown RBP21.54■■□□□ 1.04
SCARF1-208ENST00000574545 NOLC1Q14978 699 aaKnown RBP eCLIP21.54■■□□□ 1.04
SCARF1-208ENST00000574545 PRSS55Q6UWB4 352 aaPredicted RBP21.54■■□□□ 1.04
SCARF1-208ENST00000574545 C15orf39Q6ZRI6 1047 aa21.54■■□□□ 1.04
SCARF1-208ENST00000574545 LINC00301Q8NCQ3 95 aa21.54■■□□□ 1.04
SCARF1-208ENST00000574545 RASSF8Q8NHQ8 419 aa21.54■■□□□ 1.04
SCARF1-208ENST00000574545 EDAQ92838 391 aa21.54■■□□□ 1.04
SCARF1-208ENST00000574545 CLSTN3Q9BQT9 956 aa21.54■■□□□ 1.04
SCARF1-208ENST00000574545 STK17AQ9UEE5 414 aa21.54■■□□□ 1.04
SCARF1-208ENST00000574545 TBX20Q9UMR3 447 aa21.54■■□□□ 1.04
SCARF1-208ENST00000574545 VWA8A3KMH1 1905 aa21.54■■□□□ 1.04
SCARF1-208ENST00000574545 CITO14578 2027 aa21.53■■□□□ 1.04
SCARF1-208ENST00000574545 C2CD4DB7Z1M9 353 aa21.53■■□□□ 1.04
SCARF1-208ENST00000574545 FAM189A1O60320 539 aa21.53■■□□□ 1.04
SCARF1-208ENST00000574545 B3GAT3O94766 335 aa21.53■■□□□ 1.04
SCARF1-208ENST00000574545 FGFR3P22607 806 aa21.53■■□□□ 1.04
SCARF1-208ENST00000574545 GTF2BQ00403 316 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms