RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 PTPRHQ9HD43 1115 aa20.57■□□□□ 0.88
IFT140-208ENST00000566818 CACNG4Q9UBN1 327 aa20.57■□□□□ 0.88
IFT140-208ENST00000566818 BRD1O95696 1058 aa20.56■□□□□ 0.88
IFT140-208ENST00000566818 KRT18P05783 430 aaKnown RBP20.56■□□□□ 0.88
IFT140-208ENST00000566818 MAPTP10636 758 aaKnown RBP20.56■□□□□ 0.88
IFT140-208ENST00000566818 HARSP12081 509 aaKnown RBP20.56■□□□□ 0.88
IFT140-208ENST00000566818 PLCG1P19174 1290 aa20.56■□□□□ 0.88
IFT140-208ENST00000566818 SYT1P21579 422 aa20.56■□□□□ 0.88
IFT140-208ENST00000566818 PROZP22891 400 aa20.56■□□□□ 0.88
IFT140-208ENST00000566818 ZXDAP98168 799 aa20.56■□□□□ 0.88
IFT140-208ENST00000566818 NOLC1Q14978 699 aaKnown RBP eCLIP20.56■□□□□ 0.88
IFT140-208ENST00000566818 GLRA4Q5JXX5 417 aa20.56■□□□□ 0.88
IFT140-208ENST00000566818 CYP26C1Q6V0L0 522 aa20.56■□□□□ 0.88
IFT140-208ENST00000566818 CCDC149Q6ZUS6 474 aa20.56■□□□□ 0.88
IFT140-208ENST00000566818 SLC38A7Q9NVC3 462 aa20.56■□□□□ 0.88
IFT140-208ENST00000566818 ANKFY1Q9P2R3 1169 aa20.56■□□□□ 0.88
IFT140-208ENST00000566818 USTQ9Y2C2 406 aa20.56■□□□□ 0.88
IFT140-208ENST00000566818 ARIH1Q9Y4X5 557 aaPredicted RBP20.56■□□□□ 0.88
IFT140-208ENST00000566818 C2CD4DB7Z1M9 353 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 TMEM189-UBE2V1I3L0A0 370 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 TOM1L1O75674 476 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 FAM13AO94988 1023 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 NCKAP1LP55160 1127 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 OSTNP61366 133 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 CACNB1Q02641 598 aaPredicted RBP20.55■□□□□ 0.88
IFT140-208ENST00000566818 RESTQ13127 1097 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 KARSQ15046 597 aaKnown RBP20.55■□□□□ 0.88
IFT140-208ENST00000566818 FAM171A1Q5VUB5 890 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 KANK3Q6NY19 840 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 ZPBP2Q6X784 338 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 PLCD3Q8N3E9 789 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 CEP120Q8N960 986 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 PIK3R5Q8WYR1 880 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 RAD54LQ92698 747 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 ACSF2Q96CM8 615 aaPredicted RBP20.55■□□□□ 0.88
IFT140-208ENST00000566818 BICD1Q96G01 975 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 SNX27Q96L92 541 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 ACAP3Q96P50 834 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 REEP2Q9BRK0 252 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 CXCL16Q9H2A7 254 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 PLEKHA4Q9H4M7 779 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 PLXNA3P51805 1871 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 DENND4AQ7Z401 1863 aa20.55■□□□□ 0.88
IFT140-208ENST00000566818 NPHP3-ACAD11A0A0J9YXS1 232 aa20.54■□□□□ 0.88
IFT140-208ENST00000566818 SMIM28A0A1B0GU29 152 aa20.54■□□□□ 0.88
IFT140-208ENST00000566818 TBCAO75347 108 aaKnown RBP20.54■□□□□ 0.88
IFT140-208ENST00000566818 TXLNAP40222 546 aa20.54■□□□□ 0.88
IFT140-208ENST00000566818 MATR3P43243 847 aaKnown RBP eCLIP20.54■□□□□ 0.88
IFT140-208ENST00000566818 DHX8Q14562 1220 aaKnown RBP20.54■□□□□ 0.88
IFT140-208ENST00000566818 PSMD5Q16401 504 aa20.54■□□□□ 0.88
IFT140-208ENST00000566818 ARSHQ5FYA8 562 aa20.54■□□□□ 0.88
IFT140-208ENST00000566818 RTP2Q5QGT7 225 aa20.54■□□□□ 0.88
IFT140-208ENST00000566818 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.54■□□□□ 0.88
IFT140-208ENST00000566818 TRIM67Q6ZTA4 783 aa20.54■□□□□ 0.88
IFT140-208ENST00000566818 CEP57Q86XR8 500 aa20.54■□□□□ 0.88
IFT140-208ENST00000566818 PALB2Q86YC2 1186 aa20.54■□□□□ 0.88
IFT140-208ENST00000566818 LARP4BQ92615 738 aaKnown RBP20.54■□□□□ 0.88
IFT140-208ENST00000566818 MFSD14AQ96MC6 490 aa20.54■□□□□ 0.88
IFT140-208ENST00000566818 CCSER1Q9C0I3 900 aa20.54■□□□□ 0.88
IFT140-208ENST00000566818 PARVGQ9HBI0 331 aa20.54■□□□□ 0.88
IFT140-208ENST00000566818 BLOC1S4Q9NUP1 217 aa20.54■□□□□ 0.88
IFT140-208ENST00000566818 CLIC4Q9Y696 253 aa20.54■□□□□ 0.88
IFT140-208ENST00000566818 TMEM221A6NGB7 291 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 K7ENM7 598 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 M0R296 226 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 ABLIM1O14639 778 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 TRAPPC3O43617 180 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 B3GAT3O94766 335 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 ABCD1P33897 745 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 GRIN1Q05586 938 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 SIGLEC14Q08ET2 396 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 MCM6Q14566 821 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 XKR4Q5GH76 650 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 DCLRE1AQ6PJP8 1040 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 PRSS55Q6UWB4 352 aaPredicted RBP20.53■□□□□ 0.88
IFT140-208ENST00000566818 OTOP3Q7RTS5 596 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 GLYCTKQ8IVS8 523 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 ZDHHC14Q8IZN3 488 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 MYCT1Q8N699 235 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 DDX27Q96GQ7 796 aaKnown RBP20.53■□□□□ 0.88
IFT140-208ENST00000566818 RHOBTB2Q9BYZ6 727 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 ZSCAN16Q9H4T2 348 aaPredicted RBP20.53■□□□□ 0.88
IFT140-208ENST00000566818 ZDHHC7Q9NXF8 308 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 CCDC39Q9UFE4 941 aa20.53■□□□□ 0.88
IFT140-208ENST00000566818 CCDC195A0A1B0GUA6 201 aa20.52■□□□□ 0.88
IFT140-208ENST00000566818 CLDN3O15551 220 aa20.52■□□□□ 0.88
IFT140-208ENST00000566818 TGM5O43548 720 aa20.52■□□□□ 0.88
IFT140-208ENST00000566818 KCNE1P15382 129 aa20.52■□□□□ 0.88
IFT140-208ENST00000566818 RPL17P18621 184 aaKnown RBP20.52■□□□□ 0.88
IFT140-208ENST00000566818 CLCNKBP51801 687 aa20.52■□□□□ 0.88
IFT140-208ENST00000566818 MTMR3Q13615 1198 aa20.52■□□□□ 0.88
IFT140-208ENST00000566818 PTPAQ15257 358 aa20.52■□□□□ 0.88
IFT140-208ENST00000566818 ALKAL1Q6UXT8 129 aa20.52■□□□□ 0.88
IFT140-208ENST00000566818 HFE2Q6ZVN8 426 aa20.52■□□□□ 0.88
IFT140-208ENST00000566818 HAUS6Q7Z4H7 955 aa20.52■□□□□ 0.88
IFT140-208ENST00000566818 STAMQ92783 540 aa20.52■□□□□ 0.88
IFT140-208ENST00000566818 KCNN1Q92952 543 aa20.52■□□□□ 0.88
IFT140-208ENST00000566818 FOXD4L1Q9NU39 408 aa20.52■□□□□ 0.88
IFT140-208ENST00000566818 CNTN3Q9P232 1028 aa20.52■□□□□ 0.88
IFT140-208ENST00000566818 STK17AQ9UEE5 414 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms