RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.68■□□□□ 0.262e-6■■■□□ 19.1
CMTM3-212ENST00000566121 KLK14Q9P0G3 267 aa16.68■□□□□ 0.26
CMTM3-212ENST00000566121 CDH22Q9UJ99 828 aa16.68■□□□□ 0.26
CMTM3-212ENST00000566121 DMDP11532 3685 aa16.68■□□□□ 0.26
CMTM3-212ENST00000566121 USP34Q70CQ2 3546 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 F8W810 466 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 H0YCG3 227 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 C2CD2LO14523 706 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 TRAPPC3O43617 180 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 HIP1RO75146 1068 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 SSBP05455 408 aaKnown RBP eCLIP16.67■□□□□ 0.26
CMTM3-212ENST00000566121 HNRNPA1P09651 372 aaKnown RBP eCLIP16.67■□□□□ 0.26
CMTM3-212ENST00000566121 KCNE1P15382 129 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 FGFR3P22607 806 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 GJB2P29033 226 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 AVPR2P30518 371 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 ZPBP2Q6X784 338 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 TAS1R3Q7RTX0 852 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 RIN2Q8WYP3 895 aaPredicted RBP16.67■□□□□ 0.26
CMTM3-212ENST00000566121 CLSTN3Q9BQT9 956 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 SLC38A7Q9NVC3 462 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 LIMD1Q9UGP4 676 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 BACE2Q9Y5Z0 518 aa16.67■□□□□ 0.26
CMTM3-212ENST00000566121 SMIM28A0A1B0GU29 152 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 H3BQV1 296 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 ABLIM1O14639 778 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 ZMYND10O75800 440 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 KIF4AO95239 1232 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 PLS3P13797 630 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 RPL9P32969 192 aaKnown RBP16.66■□□□□ 0.26
CMTM3-212ENST00000566121 ABCD1P33897 745 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 CLCN5P51795 746 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 SMTNP53814 917 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 SLC12A3P55017 1021 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 PEX3P56589 373 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 TDGQ13569 410 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 CUL4AQ13619 759 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 RAB33AQ14088 237 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 UPP1Q16831 310 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 TMEM119Q4V9L6 283 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 RTP2Q5QGT7 225 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 KANK3Q6NY19 840 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 BRAPQ7Z569 592 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 ZBTB33Q86T24 672 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 PNMA5Q96PV4 448 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 TSPAN18Q96SJ8 248 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 PAAF1Q9BRP4 392 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 KMT5AQ9NQR1 393 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 TSHZ2Q9NRE2 1034 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 FBXW11Q9UKB1 542 aa16.66■□□□□ 0.26
CMTM3-212ENST00000566121 ZFHX2Q9C0A1 2572 aaPredicted RBP16.66■□□□□ 0.26
CMTM3-212ENST00000566121 WDR87Q6ZQQ6 2873 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 TOM1L1O75674 476 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 WEE2P0C1S8 567 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 TMEM132AQ24JP5 1023 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 FAM171A1Q5VUB5 890 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 MCTP1Q6DN14 999 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 CD300LGQ6UXG3 332 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 KCNK18Q7Z418 384 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 TMEM161BQ8NDZ6 487 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 KIFC3Q9BVG8 833 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 RUSC1Q9BVN2 902 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 CCDC94Q9BW85 323 aaPredicted RBP16.65■□□□□ 0.26
CMTM3-212ENST00000566121 CDT1Q9H211 546 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 KCNK12Q9HB15 430 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 CNTN3Q9P232 1028 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 ODF2LQ9ULJ1 636 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 MAFFQ9ULX9 164 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 SMC3Q9UQE7 1217 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 MORC2Q9Y6X9 1032 aaPredicted RBP16.65■□□□□ 0.26
CMTM3-212ENST00000566121 CLUHO75153 1309 aa16.65■□□□□ 0.26
CMTM3-212ENST00000566121 CCDC169A6NNP5 214 aa16.64■□□□□ 0.25
CMTM3-212ENST00000566121 PP2D1A8MPX8 630 aa16.64■□□□□ 0.25
CMTM3-212ENST00000566121 CD2BP2O95400 341 aaKnown RBP16.64■□□□□ 0.25
CMTM3-212ENST00000566121 CDC25AP30304 524 aa16.64■□□□□ 0.25
CMTM3-212ENST00000566121 LONP1P36776 959 aaKnown RBP16.64■□□□□ 0.25
CMTM3-212ENST00000566121 YARSP54577 528 aaKnown RBP16.64■□□□□ 0.25
CMTM3-212ENST00000566121 KYAT1Q16773 422 aa16.64■□□□□ 0.25
CMTM3-212ENST00000566121 LARP1BQ659C4 914 aaKnown RBP16.64■□□□□ 0.25
CMTM3-212ENST00000566121 MPZL3Q6UWV2 235 aa16.64■□□□□ 0.25
CMTM3-212ENST00000566121 SMG7Q92540 1137 aaKnown RBP16.64■□□□□ 0.25
CMTM3-212ENST00000566121 PLEKHA5Q9HAU0 1116 aa16.64■□□□□ 0.25
CMTM3-212ENST00000566121 LARSQ9P2J5 1176 aaKnown RBP16.64■□□□□ 0.25
CMTM3-212ENST00000566121 MTRRQ9UBK8 725 aa16.64■□□□□ 0.25
CMTM3-212ENST00000566121 DUSP12Q9UNI6 340 aa16.64■□□□□ 0.25
CMTM3-212ENST00000566121 RIF1Q5UIP0 2472 aaKnown RBP16.64■□□□□ 0.25
CMTM3-212ENST00000566121 MYO15AQ9UKN7 3530 aa16.64■□□□□ 0.25
CMTM3-212ENST00000566121 CASTOR2A6NHX0 329 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 SPDYE4A6NLX3 237 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 ANHXE9PGG2 379 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 SYN3O14994 580 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 N4BP1O75113 896 aaKnown RBP16.63■□□□□ 0.25
CMTM3-212ENST00000566121 RFPL2O75678 378 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 B3GAT3O94766 335 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 PLA2G4BP0C869 781 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 MAPTP10636 758 aaKnown RBP16.63■□□□□ 0.25
CMTM3-212ENST00000566121 PDCP20941 246 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 ZNF131P52739 623 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 MCL1Q07820 350 aa16.63■□□□□ 0.25
CMTM3-212ENST00000566121 TCF15Q12870 199 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms