RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 MOCS1Q9NZB8 636 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 EIF2B4Q9UI10 523 aaKnown RBP5.59□□□□□ -1.51
PALB2-203ENST00000565038 IPPQ9Y573 584 aa5.59□□□□□ -1.51
PALB2-203ENST00000565038 MYBBP1AQ9BQG0 1328 aaKnown RBP5.58□□□□□ -1.52
PALB2-203ENST00000565038 GRXCR1A8MXD5 290 aa5.58□□□□□ -1.52
PALB2-203ENST00000565038 GPR32O75388 356 aa5.58□□□□□ -1.52
PALB2-203ENST00000565038 SCAF4O95104 1147 aaKnown RBP5.58□□□□□ -1.52
PALB2-203ENST00000565038 ATP5JP18859 108 aa5.58□□□□□ -1.52
PALB2-203ENST00000565038 DDCP20711 480 aa5.58□□□□□ -1.52
PALB2-203ENST00000565038 NHLH2Q02577 135 aa5.58□□□□□ -1.52
PALB2-203ENST00000565038 RABL3Q5HYI8 236 aa5.58□□□□□ -1.52
PALB2-203ENST00000565038 METTL24Q5JXM2 366 aa5.58□□□□□ -1.52
PALB2-203ENST00000565038 ATXN7L2Q5T6C5 722 aaPredicted RBP5.58□□□□□ -1.52
PALB2-203ENST00000565038 CPT1CQ8TCG5 803 aa5.58□□□□□ -1.52
PALB2-203ENST00000565038 CACTINQ8WUQ7 758 aaKnown RBP5.58□□□□□ -1.52
PALB2-203ENST00000565038 HDAC10Q969S8 669 aa5.58□□□□□ -1.52
PALB2-203ENST00000565038 CYFIP2Q96F07 1278 aa5.58□□□□□ -1.52
PALB2-203ENST00000565038 ZNF703Q9H7S9 590 aaPredicted RBP5.58□□□□□ -1.52
PALB2-203ENST00000565038 TDP1Q9NUW8 608 aa5.58□□□□□ -1.52
PALB2-203ENST00000565038 IP6K2Q9UHH9 426 aa5.58□□□□□ -1.52
PALB2-203ENST00000565038 CLCA2Q9UQC9 943 aa5.58□□□□□ -1.52
PALB2-203ENST00000565038 PJA2O43164 708 aa5.57□□□□□ -1.52
PALB2-203ENST00000565038 SNRPA1P09661 255 aaKnown RBP5.57□□□□□ -1.52
PALB2-203ENST00000565038 ADKP55263 362 aaKnown RBP5.57□□□□□ -1.52
PALB2-203ENST00000565038 RNASE9P60153 205 aaKnown RBP5.57□□□□□ -1.52
PALB2-203ENST00000565038 ATP8B2P98198 1209 aa5.57□□□□□ -1.52
PALB2-203ENST00000565038 TARDBPQ13148 414 aaKnown RBP eCLIP5.57□□□□□ -1.52
PALB2-203ENST00000565038 MTM1Q13496 603 aa5.57□□□□□ -1.52
PALB2-203ENST00000565038 TTF1Q15361 905 aaPredicted RBP5.57□□□□□ -1.52
PALB2-203ENST00000565038 LSM12Q3MHD2 195 aaKnown RBP5.57□□□□□ -1.52
PALB2-203ENST00000565038 RRP12Q5JTH9 1297 aaKnown RBP5.57□□□□□ -1.52
PALB2-203ENST00000565038 MIIPQ5JXC2 388 aa5.57□□□□□ -1.52
PALB2-203ENST00000565038 ZNF529Q6P280 563 aa5.57□□□□□ -1.52
PALB2-203ENST00000565038 RSPH3Q86UC2 560 aa5.57□□□□□ -1.52
PALB2-203ENST00000565038 CMTR2Q8IYT2 770 aaKnown RBP5.57□□□□□ -1.52
PALB2-203ENST00000565038 MIER2Q8N344 545 aa5.57□□□□□ -1.52
PALB2-203ENST00000565038 CPA6Q8N4T0 437 aa5.57□□□□□ -1.52
PALB2-203ENST00000565038 ZFP28Q8NHY6 868 aa5.57□□□□□ -1.52
PALB2-203ENST00000565038 CASKIN2Q8WXE0 1202 aa5.57□□□□□ -1.52
PALB2-203ENST00000565038 TMX3Q96JJ7 454 aa5.57□□□□□ -1.52
PALB2-203ENST00000565038 FAM193BQ96PV7 902 aaPredicted RBP5.57□□□□□ -1.52
PALB2-203ENST00000565038 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
PALB2-203ENST00000565038 SLC23A1Q9UHI7 598 aa5.57□□□□□ -1.52
PALB2-203ENST00000565038 NPIPB8E9PQR5 432 aa5.56□□□□□ -1.52
PALB2-203ENST00000565038 RPS6KA4O75676 772 aa5.56□□□□□ -1.52
PALB2-203ENST00000565038 IL33O95760 270 aa5.56□□□□□ -1.52
PALB2-203ENST00000565038 C6P13671 934 aa5.56□□□□□ -1.52
PALB2-203ENST00000565038 CHN2P52757 468 aa5.56□□□□□ -1.52
PALB2-203ENST00000565038 IGFL4Q6B9Z1 124 aa5.56□□□□□ -1.52
PALB2-203ENST00000565038 DRICH1Q6PGQ1 229 aaPredicted RBP5.56□□□□□ -1.52
PALB2-203ENST00000565038 CRIP3Q6Q6R5 217 aa5.56□□□□□ -1.52
PALB2-203ENST00000565038 MED25Q71SY5 747 aa5.56□□□□□ -1.52
PALB2-203ENST00000565038 UBE3BQ7Z3V4 1068 aa5.56□□□□□ -1.52
PALB2-203ENST00000565038 TEX101Q9BY14 249 aa5.56□□□□□ -1.52
PALB2-203ENST00000565038 ZNF768Q9H5H4 540 aaKnown RBP5.56□□□□□ -1.52
PALB2-203ENST00000565038 SLC2A4RGQ9NR83 387 aa5.56□□□□□ -1.52
PALB2-203ENST00000565038 TRPM5Q9NZQ8 1165 aa5.56□□□□□ -1.52
PALB2-203ENST00000565038 PCDHB1Q9Y5F3 818 aa5.56□□□□□ -1.52
PALB2-203ENST00000565038 TCRBV7S2A1N4TA0A589 114 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 DRGXA6NNA5 263 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 AHRRA9YTQ3 701 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 ZNF185O15231 689 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 RECQL4O94761 1208 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 TACR2P21452 398 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 SLC6A2P23975 617 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 MGAT1P26572 445 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 ZXDAP98168 799 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 CDC42EP1Q00587 391 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 MCL1Q07820 350 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 TUBA3CQ13748 450 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 LCE5AQ5TCM9 118 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 OTUD7BQ6GQQ9 843 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 TUBA3EQ6PEY2 450 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 Q8N1X5 172 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 HSPBAP1Q96EW2 488 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 CLPTM1LQ96KA5 538 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 FBXO34Q9NWN3 711 aa5.55□□□□□ -1.52
PALB2-203ENST00000565038 REXO2Q9Y3B8 237 aaKnown RBP5.55□□□□□ -1.52
PALB2-203ENST00000565038 KIAA0391O15091 583 aaKnown RBP5.54□□□□□ -1.52
PALB2-203ENST00000565038 TRIM24O15164 1050 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 TEX33O43247 280 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 POMCP01189 267 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 PF4V1P10720 104 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 NR4A1P22736 598 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 RAB27AP51159 221 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 ZNF280AP59817 542 aaPredicted RBP5.54□□□□□ -1.52
PALB2-203ENST00000565038 CTXN1P60606 82 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 FAM189BP81408 668 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 UBXN2BQ14CS0 331 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 TMEM240Q5SV17 173 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 FNDC7Q5VTL7 733 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 SEM1Q6ZVN7 128 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 CATIPQ7Z7H3 387 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 RAVER1Q8IY67 606 aaKnown RBP5.54□□□□□ -1.52
PALB2-203ENST00000565038 ZNF276Q8N554 614 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 IFI44Q8TCB0 444 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 NEU1Q99519 415 aa5.54□□□□□ -1.52
PALB2-203ENST00000565038 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.54□□□□□ -1.52
PALB2-203ENST00000565038 USP15Q9Y4E8 981 aaPredicted RBP5.54□□□□□ -1.52
PALB2-203ENST00000565038 HS3ST3A1Q9Y663 406 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms