RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 B3GALT6Q96L58 329 aa22.63■■□□□ 1.21
PSEN1-225ENST00000560005 JPH2Q9BR39 696 aaPredicted RBP22.63■■□□□ 1.21
PSEN1-225ENST00000560005 RPP25Q9BUL9 199 aaKnown RBP22.63■■□□□ 1.21
PSEN1-225ENST00000560005 TNMDQ9H2S6 317 aa22.63■■□□□ 1.21
PSEN1-225ENST00000560005 MINDY3Q9H8M7 445 aa22.63■■□□□ 1.21
PSEN1-225ENST00000560005 ZDHHC7Q9NXF8 308 aa22.63■■□□□ 1.21
PSEN1-225ENST00000560005 NCDNQ9UBB6 729 aa22.63■■□□□ 1.21
PSEN1-225ENST00000560005 ZFHX4Q86UP3 3567 aa22.63■■□□□ 1.21
PSEN1-225ENST00000560005 NR1I2O75469 434 aa22.62■■□□□ 1.21
PSEN1-225ENST00000560005 SRGAP2CP0DJJ0 459 aa22.62■■□□□ 1.21
PSEN1-225ENST00000560005 LONP1P36776 959 aaKnown RBP22.62■■□□□ 1.21
PSEN1-225ENST00000560005 SYKP43405 635 aa22.62■■□□□ 1.21
PSEN1-225ENST00000560005 GPC5P78333 572 aa22.62■■□□□ 1.21
PSEN1-225ENST00000560005 B3GNT9Q6UX72 402 aa22.62■■□□□ 1.21
PSEN1-225ENST00000560005 DTHD1Q6ZMT9 781 aa22.62■■□□□ 1.21
PSEN1-225ENST00000560005 GLYCTKQ8IVS8 523 aa22.62■■□□□ 1.21
PSEN1-225ENST00000560005 FMR1NBQ8N0W7 255 aaPredicted RBP22.62■■□□□ 1.21
PSEN1-225ENST00000560005 SHDQ96IW2 340 aa22.62■■□□□ 1.21
PSEN1-225ENST00000560005 PRKD2Q9BZL6 878 aa22.62■■□□□ 1.21
PSEN1-225ENST00000560005 SPATA6Q9NWH7 488 aaPredicted RBP22.62■■□□□ 1.21
PSEN1-225ENST00000560005 HOOK1Q9UJC3 728 aaKnown RBP22.62■■□□□ 1.21
PSEN1-225ENST00000560005 MIA3Q5JRA6 1907 aa22.62■■□□□ 1.21
PSEN1-225ENST00000560005 COL4A3Q01955 1670 aa22.62■■□□□ 1.21
PSEN1-225ENST00000560005 MTCL1Q9Y4B5 1905 aaKnown RBP22.61■■□□□ 1.21
PSEN1-225ENST00000560005 A0A1B0GVL5 298 aa22.61■■□□□ 1.21
PSEN1-225ENST00000560005 NEMFO60524 1076 aa22.61■■□□□ 1.21
PSEN1-225ENST00000560005 ITGA4P13612 1032 aa22.61■■□□□ 1.21
PSEN1-225ENST00000560005 SNW1Q13573 536 aaKnown RBP22.61■■□□□ 1.21
PSEN1-225ENST00000560005 VARS2Q5ST30 1063 aaKnown RBP22.61■■□□□ 1.21
PSEN1-225ENST00000560005 SHC4Q6S5L8 630 aa22.61■■□□□ 1.21
PSEN1-225ENST00000560005 LRSAM1Q6UWE0 723 aa22.61■■□□□ 1.21
PSEN1-225ENST00000560005 SRGAP1Q7Z6B7 1085 aa22.61■■□□□ 1.21
PSEN1-225ENST00000560005 ELOA2Q8IYF1 753 aaPredicted RBP22.61■■□□□ 1.21
PSEN1-225ENST00000560005 C4orf32Q8N8J7 132 aa22.61■■□□□ 1.21
PSEN1-225ENST00000560005 SMG8Q8ND04 991 aaKnown RBP22.61■■□□□ 1.21
PSEN1-225ENST00000560005 FGF14Q92915 247 aa22.61■■□□□ 1.21
PSEN1-225ENST00000560005 GAD1Q99259 594 aa22.61■■□□□ 1.21
PSEN1-225ENST00000560005 UBN1Q9NPG3 1134 aa22.61■■□□□ 1.21
PSEN1-225ENST00000560005 CHST7Q9NS84 486 aa22.61■■□□□ 1.21
PSEN1-225ENST00000560005 USP25Q9UHP3 1055 aa22.61■■□□□ 1.21
PSEN1-225ENST00000560005 HPSEQ9Y251 543 aa22.61■■□□□ 1.21
PSEN1-225ENST00000560005 ARL5CA6NH57 179 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 ZNF202O95125 648 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 TDP2O95551 362 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 OR52Z1P0C646 297 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 PFKFB1P16118 471 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 TXLNAP40222 546 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 MLH1P40692 756 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 NPEPPSP55786 919 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 DSC1Q08554 894 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 ZNF528Q3MIS6 628 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 Q4G0T1 1027 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 PARM1Q6UWI2 310 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 CNNM3Q8NE01 707 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 PRPF31Q8WWY3 499 aaKnown RBP22.6■■□□□ 1.21
PSEN1-225ENST00000560005 SLC7A3Q8WY07 619 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 TMEM143Q96AN5 459 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 BCO2Q9BYV7 579 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 RAB34Q9BZG1 259 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 RNF39Q9H2S5 420 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 GOLPH3LQ9H4A5 285 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 KCNH3Q9ULD8 1083 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 IPPQ9Y573 584 aa22.6■■□□□ 1.21
PSEN1-225ENST00000560005 CYP3A7-CYP3A51PA0A087WV96 503 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 KANSL1LA0AUZ9 987 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 SPTLC1O15269 473 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 LAMTOR5O43504 91 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 C1RP00736 705 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 RPL17P18621 184 aaKnown RBP22.59■■□□□ 1.21
PSEN1-225ENST00000560005 FSHRP23945 695 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 CYP3A7P24462 503 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 SCNN1GP51170 649 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 NDUFA8P51970 172 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 ATXN1P54253 815 aaKnown RBP22.59■■□□□ 1.21
PSEN1-225ENST00000560005 PSMC5P62195 406 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 LILRA6Q6PI73 481 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 PSPC1Q8WXF1 523 aaKnown RBP22.59■■□□□ 1.21
PSEN1-225ENST00000560005 AK8Q96MA6 479 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 ZFP42Q96MM3 310 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 CLIC6Q96NY7 704 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.59■■□□□ 1.21
PSEN1-225ENST00000560005 MIOSQ9NXC5 875 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 FBXO4Q9UKT5 387 aa22.59■■□□□ 1.21
PSEN1-225ENST00000560005 ZFP37Q9Y6Q3 630 aaPredicted RBP22.59■■□□□ 1.21
PSEN1-225ENST00000560005 DOCK6Q96HP0 2047 aa22.58■■□□□ 1.21
PSEN1-225ENST00000560005 SYCE3A1L190 88 aa22.58■■□□□ 1.21
PSEN1-225ENST00000560005 VWA3AA6NCI4 1184 aa22.58■■□□□ 1.21
PSEN1-225ENST00000560005 GOLGA6L3A6NEY3 463 aa22.58■■□□□ 1.21
PSEN1-225ENST00000560005 CSTF1Q05048 431 aaKnown RBP22.58■■□□□ 1.21
PSEN1-225ENST00000560005 LAMTOR4Q0VGL1 99 aa22.58■■□□□ 1.21
PSEN1-225ENST00000560005 UBXN2BQ14CS0 331 aa22.58■■□□□ 1.21
PSEN1-225ENST00000560005 COLEC11Q9BWP8 271 aa22.58■■□□□ 1.21
PSEN1-225ENST00000560005 EIF2AQ9BY44 585 aaKnown RBP22.58■■□□□ 1.21
PSEN1-225ENST00000560005 GPR62Q9BZJ7 368 aa22.58■■□□□ 1.21
PSEN1-225ENST00000560005 CSRNP2Q9H175 543 aa22.58■■□□□ 1.21
PSEN1-225ENST00000560005 BMP2KQ9NSY1 1161 aaPredicted RBP22.58■■□□□ 1.21
PSEN1-225ENST00000560005 MTF2Q9Y483 593 aaPredicted RBP22.58■■□□□ 1.21
PSEN1-225ENST00000560005 HES2Q9Y543 173 aa22.58■■□□□ 1.21
PSEN1-225ENST00000560005 WNT7AO00755 349 aa22.57■■□□□ 1.2
PSEN1-225ENST00000560005 ZMYND10O75800 440 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms