RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 FNDC7Q5VTL7 733 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 EFCAB2Q5VUJ9 269 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 AFMIDQ63HM1 303 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 DOK3Q7L591 496 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 FAM83AQ86UY5 434 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 RNF169Q8NCN4 708 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.43□□□□□ -1.7
CASC4-210ENST00000559550 CCHCR1Q8TD31 782 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 UHRF1Q96T88 793 aaPredicted RBP4.43□□□□□ -1.7
CASC4-210ENST00000559550 CSRNP2Q9H175 543 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 TYW1Q9NV66 732 aaKnown RBP4.43□□□□□ -1.7
CASC4-210ENST00000559550 AJAP1Q9UKB5 411 aaPredicted RBP4.43□□□□□ -1.7
CASC4-210ENST00000559550 IPPQ9Y573 584 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 MRFAP1Q9Y605 127 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 XDHP47989 1333 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 PNPLA7Q6ZV29 1317 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 KRTAP29-1A8MX34 341 aaPredicted RBP4.42□□□□□ -1.7
CASC4-210ENST00000559550 CXorf49A8MYA2 514 aaPredicted RBP4.42□□□□□ -1.7
CASC4-210ENST00000559550 B5MCH6 92 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 HTRA2O43464 458 aaPredicted RBP4.42□□□□□ -1.7
CASC4-210ENST00000559550 ENDOD1O94919 500 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 CCND1P24385 295 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 ALDH1A3P47895 512 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 FLT3LGP49771 235 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 SLC25A3Q00325 362 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 CNGB1Q14028 1251 aaPredicted RBP4.42□□□□□ -1.7
CASC4-210ENST00000559550 TOB2Q14106 344 aaPredicted RBP4.42□□□□□ -1.7
CASC4-210ENST00000559550 BMT2Q1RMZ1 405 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 DCAF17Q5H9S7 520 aaPredicted RBP4.42□□□□□ -1.7
CASC4-210ENST00000559550 FAM47AQ5JRC9 791 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 NAIF1Q69YI7 327 aaPredicted RBP4.42□□□□□ -1.7
CASC4-210ENST00000559550 FAM180AQ6UWF9 173 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 TMPRSS6Q8IU80 811 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 SYT12Q8IV01 421 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 RHOT1Q8IXI2 618 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 COA7Q96BR5 231 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 C7orf25Q9BPX7 421 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 SPON1Q9HCB6 807 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 HDAC5Q9UQL6 1122 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 SPEF1Q9Y4P9 236 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 PCDHA13Q9Y5I0 950 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 DMRT1Q9Y5R6 373 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 ACTL7AQ9Y615 435 aa4.42□□□□□ -1.7
CASC4-210ENST00000559550 CCDC154A6NI56 674 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 TBKBP1A7MCY6 615 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 FAM171A2A8MVW0 826 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 GOLGA6L6A8MZA4 724 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 PRR5-ARHGAP8B1AHC4 643 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 LEFTY2O00292 366 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 ALDH1L1O75891 902 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 SNUPNO95149 360 aaKnown RBP4.41□□□□□ -1.7
CASC4-210ENST00000559550 FBLP22087 321 aaKnown RBP4.41□□□□□ -1.7
CASC4-210ENST00000559550 RECQLP46063 649 aaPredicted RBP4.41□□□□□ -1.7
CASC4-210ENST00000559550 NEK2P51955 445 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 ATP8B2P98198 1209 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 COL10A1Q03692 680 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 SP140Q13342 867 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 IL10RAQ13651 578 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 TTF1Q15361 905 aaPredicted RBP4.41□□□□□ -1.7
CASC4-210ENST00000559550 VPS72Q15906 364 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 PDZD4Q76G19 769 aaPredicted RBP4.41□□□□□ -1.7
CASC4-210ENST00000559550 ZBTB46Q86UZ6 589 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 CMTR2Q8IYT2 770 aaKnown RBP4.41□□□□□ -1.7
CASC4-210ENST00000559550 CACTINQ8WUQ7 758 aaKnown RBP4.41□□□□□ -1.7
CASC4-210ENST00000559550 LARP4BQ92615 738 aaKnown RBP4.41□□□□□ -1.7
CASC4-210ENST00000559550 CHMP4CQ96CF2 233 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 HOOK2Q96ED9 719 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 MYOCQ99972 504 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 SENP6Q9GZR1 1112 aaPredicted RBP4.41□□□□□ -1.7
CASC4-210ENST00000559550 LANCL2Q9NS86 450 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 SLC23A1Q9UHI7 598 aa4.41□□□□□ -1.7
CASC4-210ENST00000559550 RUVBL1Q9Y265 456 aaKnown RBP4.41□□□□□ -1.7
CASC4-210ENST00000559550 LUC7L2Q9Y383 392 aaKnown RBP4.41□□□□□ -1.7
CASC4-210ENST00000559550 FAM20BO75063 409 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 GPR32O75388 356 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 RAP2AP10114 183 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 HSP90B1P14625 803 aaKnown RBP4.4□□□□□ -1.71
CASC4-210ENST00000559550 IL2RBP14784 551 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 APOBEC3AP31941 199 aaPredicted RBP4.4□□□□□ -1.71
CASC4-210ENST00000559550 SLC16A1P53985 500 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 ADKP55263 362 aaKnown RBP4.4□□□□□ -1.71
CASC4-210ENST00000559550 MCL1Q07820 350 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 TARDBPQ13148 414 aaKnown RBP eCLIP4.4□□□□□ -1.71
CASC4-210ENST00000559550 MTM1Q13496 603 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 METTL24Q5JXM2 366 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 GJC2Q5T442 439 aaPredicted RBP4.4□□□□□ -1.71
CASC4-210ENST00000559550 RAVER1Q8IY67 606 aaKnown RBP4.4□□□□□ -1.71
CASC4-210ENST00000559550 CPA6Q8N4T0 437 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 OR10H5Q8NGA6 315 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 TFAP2CQ92754 450 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 KAT5Q92993 513 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 PLEKHG4BQ96PX9 1271 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 NEU1Q99519 415 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 MRI1Q9BV20 369 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 ZNF703Q9H7S9 590 aaPredicted RBP4.4□□□□□ -1.71
CASC4-210ENST00000559550 AURKAIP1Q9NWT8 199 aaPredicted RBP4.4□□□□□ -1.71
CASC4-210ENST00000559550 SAP30BPQ9UHR5 308 aaKnown RBP4.4□□□□□ -1.71
CASC4-210ENST00000559550 THRAP3Q9Y2W1 955 aaKnown RBP4.4□□□□□ -1.71
CASC4-210ENST00000559550 PCDHB1Q9Y5F3 818 aa4.4□□□□□ -1.71
CASC4-210ENST00000559550 MYBBP1AQ9BQG0 1328 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms