RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 KIFAP3Q92845 792 aa22.56■■□□□ 1.2
TSPAN3-206ENST00000559373 CLSTN3Q9BQT9 956 aa22.56■■□□□ 1.2
TSPAN3-206ENST00000559373 MMTAG2Q9BU76 263 aaKnown RBP22.56■■□□□ 1.2
TSPAN3-206ENST00000559373 FNIP2Q9P278 1114 aa22.56■■□□□ 1.2
TSPAN3-206ENST00000559373 MYO15AQ9UKN7 3530 aa22.55■■□□□ 1.2
TSPAN3-206ENST00000559373 ZMYM2Q9UBW7 1377 aa22.55■■□□□ 1.2
TSPAN3-206ENST00000559373 I3L4J1 428 aa22.55■■□□□ 1.2
TSPAN3-206ENST00000559373 NPTX2P47972 431 aa22.55■■□□□ 1.2
TSPAN3-206ENST00000559373 PSMD5Q16401 504 aa22.55■■□□□ 1.2
TSPAN3-206ENST00000559373 DAW1Q8N136 415 aa22.55■■□□□ 1.2
TSPAN3-206ENST00000559373 LNX1Q8TBB1 728 aaPredicted RBP22.55■■□□□ 1.2
TSPAN3-206ENST00000559373 ATOH1Q92858 354 aaPredicted RBP22.55■■□□□ 1.2
TSPAN3-206ENST00000559373 TTPALQ9BTX7 342 aa22.55■■□□□ 1.2
TSPAN3-206ENST00000559373 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.55■■□□□ 1.2
TSPAN3-206ENST00000559373 DNM3Q9UQ16 869 aa22.55■■□□□ 1.2
TSPAN3-206ENST00000559373 MIA3Q5JRA6 1907 aa22.55■■□□□ 1.2
TSPAN3-206ENST00000559373 CFHP08603 1231 aa22.54■■□□□ 1.2
TSPAN3-206ENST00000559373 CLCNKBP51801 687 aa22.54■■□□□ 1.2
TSPAN3-206ENST00000559373 EFNA5P52803 228 aa22.54■■□□□ 1.2
TSPAN3-206ENST00000559373 NTHL1P78549 312 aa22.54■■□□□ 1.2
TSPAN3-206ENST00000559373 DCAF4L1Q3SXM0 396 aa22.54■■□□□ 1.2
TSPAN3-206ENST00000559373 KRT79Q5XKE5 535 aa22.54■■□□□ 1.2
TSPAN3-206ENST00000559373 ELMSAN1Q6PJG2 1045 aa22.54■■□□□ 1.2
TSPAN3-206ENST00000559373 DTHD1Q6ZMT9 781 aa22.54■■□□□ 1.2
TSPAN3-206ENST00000559373 TAS1R3Q7RTX0 852 aa22.54■■□□□ 1.2
TSPAN3-206ENST00000559373 PRRX2Q99811 253 aa22.54■■□□□ 1.2
TSPAN3-206ENST00000559373 PLEKHA4Q9H4M7 779 aa22.54■■□□□ 1.2
TSPAN3-206ENST00000559373 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.54■■□□□ 1.2
TSPAN3-206ENST00000559373 FBXL21Q9UKT6 434 aa22.54■■□□□ 1.2
TSPAN3-206ENST00000559373 SLC16A4O15374 487 aa22.53■■□□□ 1.2
TSPAN3-206ENST00000559373 PI15O43692 258 aa22.53■■□□□ 1.2
TSPAN3-206ENST00000559373 CENPBP07199 599 aaPredicted RBP22.53■■□□□ 1.2
TSPAN3-206ENST00000559373 HARSP12081 509 aaKnown RBP22.53■■□□□ 1.2
TSPAN3-206ENST00000559373 RINT1Q6NUQ1 792 aa22.53■■□□□ 1.2
TSPAN3-206ENST00000559373 TMX3Q96JJ7 454 aa22.53■■□□□ 1.2
TSPAN3-206ENST00000559373 ZBTB45Q96K62 511 aaPredicted RBP22.53■■□□□ 1.2
TSPAN3-206ENST00000559373 ACO2Q99798 780 aaKnown RBP22.53■■□□□ 1.2
TSPAN3-206ENST00000559373 TARS2Q9BW92 718 aaKnown RBP22.53■■□□□ 1.2
TSPAN3-206ENST00000559373 RAB34Q9BZG1 259 aa22.53■■□□□ 1.2
TSPAN3-206ENST00000559373 PRKD2Q9BZL6 878 aa22.53■■□□□ 1.2
TSPAN3-206ENST00000559373 DPP7Q9UHL4 492 aa22.53■■□□□ 1.2
TSPAN3-206ENST00000559373 DUSP12Q9UNI6 340 aa22.53■■□□□ 1.2
TSPAN3-206ENST00000559373 ZFHX2Q9C0A1 2572 aaPredicted RBP22.53■■□□□ 1.2
TSPAN3-206ENST00000559373 COL4A3Q01955 1670 aa22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 CCL16O15467 120 aa22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 B3GAT3O94766 335 aa22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 GJB2P29033 226 aa22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 BRCC3P46736 316 aa22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 SOX4Q06945 474 aaPredicted RBP22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 MAPK7Q13164 816 aa22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 ZNF568Q3ZCX4 644 aa22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 CWF19L1Q69YN2 538 aaKnown RBP22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 ASTLQ6HA08 431 aaPredicted RBP22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 GRASPQ7Z6J2 395 aaPredicted RBP22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 SIX5Q8N196 739 aa22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 TMEM130Q8N3G9 435 aa22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 C3orf58Q8NDZ4 430 aa22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 PIK3R5Q8WYR1 880 aa22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 STAMQ92783 540 aa22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 PPP1R10Q96QC0 940 aaKnown RBP22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 CDT1Q9H211 546 aa22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 KMT5AQ9NQR1 393 aa22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 POLIQ9UNA4 740 aa22.52■■□□□ 1.2
TSPAN3-206ENST00000559373 CFAP54Q96N23 3096 aa22.51■■□□□ 1.19
TSPAN3-206ENST00000559373 ZMYND10O75800 440 aa22.51■■□□□ 1.19
TSPAN3-206ENST00000559373 NPR3P17342 541 aa22.51■■□□□ 1.19
TSPAN3-206ENST00000559373 DMP1Q13316 513 aaPredicted RBP22.51■■□□□ 1.19
TSPAN3-206ENST00000559373 RABEP1Q15276 862 aa22.51■■□□□ 1.19
TSPAN3-206ENST00000559373 SEZ6Q53EL9 994 aa22.51■■□□□ 1.19
TSPAN3-206ENST00000559373 CD300LGQ6UXG3 332 aa22.51■■□□□ 1.19
TSPAN3-206ENST00000559373 RSPO2Q6UXX9 243 aaPredicted RBP22.51■■□□□ 1.19
TSPAN3-206ENST00000559373 C1orf186Q6ZWK4 172 aa22.51■■□□□ 1.19
TSPAN3-206ENST00000559373 HDAC7Q8WUI4 952 aa22.51■■□□□ 1.19
TSPAN3-206ENST00000559373 PNMA5Q96PV4 448 aa22.51■■□□□ 1.19
TSPAN3-206ENST00000559373 ZDHHC7Q9NXF8 308 aa22.51■■□□□ 1.19
TSPAN3-206ENST00000559373 TNFSF13BQ9Y275 285 aa22.51■■□□□ 1.19
TSPAN3-206ENST00000559373 NPHP3-ACAD11A0A0J9YXS1 232 aa22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 SMIM28A0A1B0GU29 152 aa22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 VWA3AA6NCI4 1184 aa22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 STK25O00506 426 aa22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 GALR2O43603 387 aaPredicted RBP22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 ST18O60284 1047 aa22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 C8AP07357 584 aa22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 TKTP29401 623 aaKnown RBP22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 OR1D2P34982 312 aa22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 CACNB1Q02641 598 aaPredicted RBP22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 SLC44A3Q8N4M1 653 aa22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 ZMAT2Q96NC0 199 aaKnown RBP22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 TCHPQ9BT92 498 aa22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 IGSF9Q9P2J2 1179 aa22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 FBXW11Q9UKB1 542 aa22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 CA14Q9ULX7 337 aa22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 TCHHQ07283 1943 aa22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 PHLPP2Q6ZVD8 1323 aa22.5■■□□□ 1.19
TSPAN3-206ENST00000559373 H3BQV1 296 aa22.49■■□□□ 1.19
TSPAN3-206ENST00000559373 PRPHP41219 470 aa22.49■■□□□ 1.19
TSPAN3-206ENST00000559373 CREMQ03060 361 aa22.49■■□□□ 1.19
TSPAN3-206ENST00000559373 UPP1Q16831 310 aa22.49■■□□□ 1.19
TSPAN3-206ENST00000559373 PPM1LQ5SGD2 360 aa22.49■■□□□ 1.19
TSPAN3-206ENST00000559373 RPP25Q9BUL9 199 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms