RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 EPHX3Q9H6B9 360 aa16.76■□□□□ 0.27
RPL28-207ENST00000558815 GOLGA2P5Q9HBQ8 144 aa16.76■□□□□ 0.27
RPL28-207ENST00000558815 TOPORSQ9NS56 1045 aaPredicted RBP16.76■□□□□ 0.27
RPL28-207ENST00000558815 STK17AQ9UEE5 414 aa16.76■□□□□ 0.27
RPL28-207ENST00000558815 SPTLC2O15270 562 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 TOM1L1O75674 476 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 F13A1P00488 732 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 WEE2P0C1S8 567 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 HOXB8P17481 243 aaPredicted RBP16.75■□□□□ 0.27
RPL28-207ENST00000558815 PROZP22891 400 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 SP100P23497 879 aaPredicted RBP16.75■□□□□ 0.27
RPL28-207ENST00000558815 NMT1P30419 496 aaKnown RBP16.75■□□□□ 0.27
RPL28-207ENST00000558815 STAT6P42226 847 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 LIG4P49917 911 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 PKP1Q13835 747 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 NOLC1Q14978 699 aaKnown RBP eCLIP16.75■□□□□ 0.27
RPL28-207ENST00000558815 TPRNQ4KMQ1 711 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 PPFIBP1Q86W92 1011 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 LINC00301Q8NCQ3 95 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 SLC22A17Q8WUG5 538 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 RPGRIP1Q96KN7 1286 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 ACAP3Q96P50 834 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 S1PR5Q9H228 398 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 SSX2IPQ9Y2D8 614 aa16.75■□□□□ 0.27
RPL28-207ENST00000558815 SF3B1O75533 1304 aaKnown RBP eCLIP16.74■□□□□ 0.27
RPL28-207ENST00000558815 ABLIM1O14639 778 aa16.74■□□□□ 0.27
RPL28-207ENST00000558815 HNRNPDLO14979 420 aaKnown RBP16.74■□□□□ 0.27
RPL28-207ENST00000558815 CLDN3O15551 220 aa16.74■□□□□ 0.27
RPL28-207ENST00000558815 LILRB3O75022 631 aa16.74■□□□□ 0.27
RPL28-207ENST00000558815 ZNF131P52739 623 aa16.74■□□□□ 0.27
RPL28-207ENST00000558815 CBX2Q14781 532 aaPredicted RBP16.74■□□□□ 0.27
RPL28-207ENST00000558815 NAB2Q15742 525 aa16.74■□□□□ 0.27
RPL28-207ENST00000558815 USP41Q3LFD5 358 aa16.74■□□□□ 0.27
RPL28-207ENST00000558815 CES5AQ6NT32 575 aa16.74■□□□□ 0.27
RPL28-207ENST00000558815 ZPBP2Q6X784 338 aa16.74■□□□□ 0.27
RPL28-207ENST00000558815 CCDC73Q6ZRK6 1079 aa16.74■□□□□ 0.27
RPL28-207ENST00000558815 SV2BQ7L1I2 683 aa16.74■□□□□ 0.27
RPL28-207ENST00000558815 CEP57Q86XR8 500 aa16.74■□□□□ 0.27
RPL28-207ENST00000558815 RNF168Q8IYW5 571 aaPredicted RBP16.74■□□□□ 0.27
RPL28-207ENST00000558815 RIN2Q8WYP3 895 aaPredicted RBP16.74■□□□□ 0.27
RPL28-207ENST00000558815 SNX27Q96L92 541 aa16.74■□□□□ 0.27
RPL28-207ENST00000558815 PPP1R10Q96QC0 940 aaKnown RBP16.74■□□□□ 0.27
RPL28-207ENST00000558815 DZANK1Q9NVP4 752 aa16.74■□□□□ 0.27
RPL28-207ENST00000558815 TBX20Q9UMR3 447 aa16.74■□□□□ 0.27
RPL28-207ENST00000558815 MUC3AQ02505 3323 aa16.74■□□□□ 0.27
RPL28-207ENST00000558815 PDCD11Q14690 1871 aaKnown RBP16.73■□□□□ 0.27
RPL28-207ENST00000558815 A0A087X0B3 334 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 SMIM28A0A1B0GU29 152 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 C19orf67A6NJJ6 358 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 TEX28O15482 410 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 ADH1AP07327 375 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 RPL17P18621 184 aaKnown RBP16.73■□□□□ 0.27
RPL28-207ENST00000558815 CLCN4P51793 760 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 CLCNKBP51801 687 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 DSG1Q02413 1049 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 FAM171A1Q5VUB5 890 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 KIAA0319Q5VV43 1072 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 PRSS55Q6UWB4 352 aaPredicted RBP16.73■□□□□ 0.27
RPL28-207ENST00000558815 TMC5Q6UXY8 1006 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 SFR1Q86XK3 245 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 PALB2Q86YC2 1186 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 SUSD6Q92537 303 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 DDX12PQ92771 950 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 FBXL18Q96ME1 805 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 PHF7Q9BWX1 381 aaPredicted RBP16.73■□□□□ 0.27
RPL28-207ENST00000558815 TSHZ2Q9NRE2 1034 aa16.73■□□□□ 0.27
RPL28-207ENST00000558815 FAM86C2PA6NEL3 165 aa16.72■□□□□ 0.27
RPL28-207ENST00000558815 MYMKA6NI61 221 aa16.72■□□□□ 0.27
RPL28-207ENST00000558815 B3GAT3O94766 335 aa16.72■□□□□ 0.27
RPL28-207ENST00000558815 YEATS4O95619 227 aa16.72■□□□□ 0.27
RPL28-207ENST00000558815 BRD1O95696 1058 aa16.72■□□□□ 0.27
RPL28-207ENST00000558815 EFEMP2O95967 443 aa16.72■□□□□ 0.27
RPL28-207ENST00000558815 IDEP14735 1019 aa16.72■□□□□ 0.27
RPL28-207ENST00000558815 IGFBP6P24592 240 aaPredicted RBP16.72■□□□□ 0.27
RPL28-207ENST00000558815 SOX4Q06945 474 aaPredicted RBP16.72■□□□□ 0.27
RPL28-207ENST00000558815 ZC2HC1CQ53FD0 456 aaPredicted RBP16.72■□□□□ 0.27
RPL28-207ENST00000558815 RTP2Q5QGT7 225 aa16.72■□□□□ 0.27
RPL28-207ENST00000558815 STAMQ92783 540 aa16.72■□□□□ 0.27
RPL28-207ENST00000558815 ZMAT2Q96NC0 199 aaKnown RBP16.72■□□□□ 0.27
RPL28-207ENST00000558815 HAPLN2Q9GZV7 340 aa16.72■□□□□ 0.27
RPL28-207ENST00000558815 MAN1C1Q9NR34 630 aa16.72■□□□□ 0.27
RPL28-207ENST00000558815 CHST7Q9NS84 486 aa16.72■□□□□ 0.27
RPL28-207ENST00000558815 TBC1D7Q9P0N9 293 aa16.72■□□□□ 0.27
RPL28-207ENST00000558815 MORC2Q9Y6X9 1032 aaPredicted RBP16.72■□□□□ 0.27
RPL28-207ENST00000558815 VWA8A3KMH1 1905 aa16.72■□□□□ 0.27
RPL28-207ENST00000558815 I3L4J1 428 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 PPP6R2O75170 966 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 GLUD1P00367 558 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 SPATA31D3P0C874 917 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 CXCL8P10145 99 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 PDIA4P13667 645 aaKnown RBP16.71■□□□□ 0.27
RPL28-207ENST00000558815 ITIH3Q06033 890 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 SPAG1Q07617 926 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 MCL1Q07820 350 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 SPATA31D4Q6ZUB0 917 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 RNF135Q8IUD6 432 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 FEZF2Q8TBJ5 459 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 C18orf25Q96B23 403 aaPredicted RBP16.71■□□□□ 0.27
RPL28-207ENST00000558815 MSTO1Q9BUK6 570 aa16.71■□□□□ 0.27
RPL28-207ENST00000558815 ADAM7Q9H2U9 754 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms