RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 IGFBP6P24592 240 aaPredicted RBP13.07□□□□□ -0.32
HERC1-202ENST00000558324 GRM5P41594 1212 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 SMTNP53814 917 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 KARSQ15046 597 aaKnown RBP13.07□□□□□ -0.32
HERC1-202ENST00000558324 SEZ6Q53EL9 994 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 ELMSAN1Q6PJG2 1045 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 MPZL3Q6UWV2 235 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 CCDC149Q6ZUS6 474 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 GPBP1Q86WP2 473 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 KREMEN2Q8NCW0 462 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 TMEM161BQ8NDZ6 487 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 SPIRE2Q8WWL2 714 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 FAM122AQ96E09 287 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 ZBTB45Q96K62 511 aaPredicted RBP13.07□□□□□ -0.32
HERC1-202ENST00000558324 PPP1R10Q96QC0 940 aaKnown RBP13.07□□□□□ -0.32
HERC1-202ENST00000558324 REEP2Q9BRK0 252 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 SMOC2Q9H3U7 446 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 ZHX3Q9H4I2 956 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 PTPRHQ9HD43 1115 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.07□□□□□ -0.32
HERC1-202ENST00000558324 TOPORSQ9NS56 1045 aaPredicted RBP13.07□□□□□ -0.32
HERC1-202ENST00000558324 CLIC4Q9Y696 253 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 PLXNA3P51805 1871 aa13.07□□□□□ -0.32
HERC1-202ENST00000558324 SMIM28A0A1B0GU29 152 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 CCDC195A0A1B0GUA6 201 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 I3L4J1 428 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 ABLIM1O14639 778 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 B3GAT3O94766 335 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 KRT18P05783 430 aaKnown RBP13.06□□□□□ -0.32
HERC1-202ENST00000558324 MAPTP10636 758 aaKnown RBP13.06□□□□□ -0.32
HERC1-202ENST00000558324 MCF2P10911 925 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 SYT1P21579 422 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 MARCKSP29966 332 aaPredicted RBP13.06□□□□□ -0.32
HERC1-202ENST00000558324 LONP1P36776 959 aaKnown RBP13.06□□□□□ -0.32
HERC1-202ENST00000558324 PLA2G5P39877 138 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.32
HERC1-202ENST00000558324 CLCNKBP51801 687 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 CREMQ03060 361 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 CEBPZQ03701 1054 aaKnown RBP13.06□□□□□ -0.32
HERC1-202ENST00000558324 SOX4Q06945 474 aaPredicted RBP13.06□□□□□ -0.32
HERC1-202ENST00000558324 MCM6Q14566 821 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 PSMD5Q16401 504 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 ARSHQ5FYA8 562 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 SPECC1Q5M775 1068 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 KCTD17Q8N5Z5 321 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 PBXIP1Q96AQ6 731 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 BICD1Q96G01 975 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 ACAP3Q96P50 834 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 TTPALQ9BTX7 342 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 KCND2Q9NZV8 630 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 LIMD1Q9UGP4 676 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 DPP7Q9UHL4 492 aa13.06□□□□□ -0.32
HERC1-202ENST00000558324 K7ELQ4 463 aaPredicted RBP13.05□□□□□ -0.32
HERC1-202ENST00000558324 K7ENM7 598 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 FAM13AO94988 1023 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 PROZP22891 400 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 SIGLEC14Q08ET2 396 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 ELAVL2Q12926 359 aaKnown RBP13.05□□□□□ -0.32
HERC1-202ENST00000558324 RESTQ13127 1097 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 MTMR3Q13615 1198 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 NOLC1Q14978 699 aaKnown RBP eCLIP13.05□□□□□ -0.32
HERC1-202ENST00000558324 C15orf39Q6ZRI6 1047 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 C3orf58Q8NDZ4 430 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 PIK3R5Q8WYR1 880 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 SMG7Q92540 1137 aaKnown RBP13.05□□□□□ -0.32
HERC1-202ENST00000558324 RAD54LQ92698 747 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 ACSF2Q96CM8 615 aaPredicted RBP13.05□□□□□ -0.32
HERC1-202ENST00000558324 SNX27Q96L92 541 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 MFSD14AQ96MC6 490 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 ZMAT2Q96NC0 199 aaKnown RBP13.05□□□□□ -0.32
HERC1-202ENST00000558324 NTPCRQ9BSD7 190 aaKnown RBP13.05□□□□□ -0.32
HERC1-202ENST00000558324 PIDD1Q9HB75 910 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 BLOC1S4Q9NUP1 217 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 FNIP2Q9P278 1114 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 LARSQ9P2J5 1176 aaKnown RBP13.05□□□□□ -0.32
HERC1-202ENST00000558324 SORCS3Q9UPU3 1222 aa13.05□□□□□ -0.32
HERC1-202ENST00000558324 ADAM12O43184 909 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 SLC26A4O43511 780 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 TBCAO75347 108 aaKnown RBP13.04□□□□□ -0.32
HERC1-202ENST00000558324 TOM1L1O75674 476 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 BRD1O95696 1058 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 BRCC3P46736 316 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 PTPAQ15257 358 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 UPP1Q16831 310 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 DCLRE1AQ6PJP8 1040 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.04□□□□□ -0.32
HERC1-202ENST00000558324 USP49Q70CQ1 688 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 OTOP3Q7RTS5 596 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 HAUS6Q7Z4H7 955 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 SUGP1Q8IWZ8 645 aaKnown RBP13.04□□□□□ -0.32
HERC1-202ENST00000558324 ZDHHC14Q8IZN3 488 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 MYCT1Q8N699 235 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 CMASQ8NFW8 434 aaPredicted RBP13.04□□□□□ -0.32
HERC1-202ENST00000558324 LNX1Q8TBB1 728 aaPredicted RBP13.04□□□□□ -0.32
HERC1-202ENST00000558324 C18orf25Q96B23 403 aaPredicted RBP13.04□□□□□ -0.32
HERC1-202ENST00000558324 EPSTI1Q96J88 318 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 UROC1Q96N76 676 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 CLSTN3Q9BQT9 956 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 PLEKHA4Q9H4M7 779 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 SLC38A7Q9NVC3 462 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms