RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 DCLRE1AQ6PJP8 1040 aa13.83□□□□□ -0.2
SNX6-207ENST00000556303 MPZL3Q6UWV2 235 aa13.83□□□□□ -0.2
SNX6-207ENST00000556303 TMC5Q6UXY8 1006 aa13.83□□□□□ -0.2
SNX6-207ENST00000556303 ZPBP2Q6X784 338 aa13.83□□□□□ -0.2
SNX6-207ENST00000556303 RTL10Q7L3V2 364 aa13.83□□□□□ -0.2
SNX6-207ENST00000556303 TAS1R3Q7RTX0 852 aa13.83□□□□□ -0.2
SNX6-207ENST00000556303 UBALD2Q8IYN6 164 aa13.83□□□□□ -0.2
SNX6-207ENST00000556303 C12orf76Q8N812 135 aaPredicted RBP13.83□□□□□ -0.2
SNX6-207ENST00000556303 TMEM161BQ8NDZ6 487 aa13.83□□□□□ -0.2
SNX6-207ENST00000556303 ACSF2Q96CM8 615 aaPredicted RBP13.83□□□□□ -0.2
SNX6-207ENST00000556303 DDX27Q96GQ7 796 aaKnown RBP13.83□□□□□ -0.2
SNX6-207ENST00000556303 PPP1R10Q96QC0 940 aaKnown RBP13.83□□□□□ -0.2
SNX6-207ENST00000556303 ZDHHC7Q9NXF8 308 aa13.83□□□□□ -0.2
SNX6-207ENST00000556303 GDAQ9Y2T3 454 aa13.83□□□□□ -0.2
SNX6-207ENST00000556303 MORC2Q9Y6X9 1032 aaPredicted RBP13.83□□□□□ -0.2
SNX6-207ENST00000556303 TRAPPC3O43617 180 aa13.82□□□□□ -0.2
SNX6-207ENST00000556303 TOM1L1O75674 476 aa13.82□□□□□ -0.2
SNX6-207ENST00000556303 PLA2G5P39877 138 aa13.82□□□□□ -0.2
SNX6-207ENST00000556303 SF3A1Q15459 793 aaKnown RBP13.82□□□□□ -0.2
SNX6-207ENST00000556303 ZNF568Q3ZCX4 644 aa13.82□□□□□ -0.2
SNX6-207ENST00000556303 LILRA6Q6PI73 481 aa13.82□□□□□ -0.2
SNX6-207ENST00000556303 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.82□□□□□ -0.2
SNX6-207ENST00000556303 OTOP3Q7RTS5 596 aa13.82□□□□□ -0.2
SNX6-207ENST00000556303 TDRD5Q8NAT2 981 aaKnown RBP13.82□□□□□ -0.2
SNX6-207ENST00000556303 RIN2Q8WYP3 895 aaPredicted RBP13.82□□□□□ -0.2
SNX6-207ENST00000556303 PIK3R5Q8WYR1 880 aa13.82□□□□□ -0.2
SNX6-207ENST00000556303 STAMQ92783 540 aa13.82□□□□□ -0.2
SNX6-207ENST00000556303 ACAP3Q96P50 834 aa13.82□□□□□ -0.2
SNX6-207ENST00000556303 TARS2Q9BW92 718 aaKnown RBP13.82□□□□□ -0.2
SNX6-207ENST00000556303 CCSER1Q9C0I3 900 aa13.82□□□□□ -0.2
SNX6-207ENST00000556303 CDT1Q9H211 546 aa13.82□□□□□ -0.2
SNX6-207ENST00000556303 MAN1C1Q9NR34 630 aa13.82□□□□□ -0.2
SNX6-207ENST00000556303 TSHZ2Q9NRE2 1034 aa13.82□□□□□ -0.2
SNX6-207ENST00000556303 MTCL1Q9Y4B5 1905 aaKnown RBP13.82□□□□□ -0.2
SNX6-207ENST00000556303 SMIM28A0A1B0GU29 152 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 CCDC195A0A1B0GUA6 201 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 TMEM221A6NGB7 291 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 CASTOR2A6NHX0 329 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 C2CD4DB7Z1M9 353 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 F8W810 466 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 M0R296 226 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 ABLIM1O14639 778 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 SLC16A4O15374 487 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 TGM5O43548 720 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 KIF4AO95239 1232 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 MAPTP10636 758 aaKnown RBP13.81□□□□□ -0.2
SNX6-207ENST00000556303 PDIA4P13667 645 aaKnown RBP13.81□□□□□ -0.2
SNX6-207ENST00000556303 KCNE1P15382 129 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 RPL9P32969 192 aaKnown RBP13.81□□□□□ -0.2
SNX6-207ENST00000556303 ZNF131P52739 623 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 MTMR3Q13615 1198 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 KYAT1Q16773 422 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 UPP1Q16831 310 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 ARSHQ5FYA8 562 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 CCDC149Q6ZUS6 474 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 HFE2Q6ZVN8 426 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 LNX1Q8TBB1 728 aaPredicted RBP13.81□□□□□ -0.2
SNX6-207ENST00000556303 FAM122AQ96E09 287 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 PRRX2Q99811 253 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 PAAF1Q9BRP4 392 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 TCHPQ9BT92 498 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 SORCS3Q9UPU3 1222 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 USP20Q9Y2K6 914 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 MYH11P35749 1972 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 CACNA1HO95180 2353 aa13.81□□□□□ -0.2
SNX6-207ENST00000556303 TRIP11Q15643 1979 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 VPS37CA5D8V6 355 aaPredicted RBP13.8□□□□□ -0.2
SNX6-207ENST00000556303 SFI1A8K8P3 1242 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 B3GAT3O94766 335 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 SYT1P21579 422 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 DDIT3P35638 169 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 NCKAP1LP55160 1127 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 MCL1Q07820 350 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 NOLC1Q14978 699 aaKnown RBP eCLIP13.8□□□□□ -0.2
SNX6-207ENST00000556303 RTP2Q5QGT7 225 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 FAM171A1Q5VUB5 890 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 ZBTB33Q86T24 672 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 RAD54LQ92698 747 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 NXPE3Q969Y0 559 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 TSPAN18Q96SJ8 248 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 PLIN2Q99541 437 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 ZSCAN16Q9H4T2 348 aaPredicted RBP13.8□□□□□ -0.2
SNX6-207ENST00000556303 PLEKHA5Q9HAU0 1116 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 PARVGQ9HBI0 331 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 WDR6Q9NNW5 1121 aaKnown RBP13.8□□□□□ -0.2
SNX6-207ENST00000556303 CNTN3Q9P232 1028 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 RAPGEFL1Q9UHV5 662 aa13.8□□□□□ -0.2
SNX6-207ENST00000556303 SRPRBQ9Y5M8 271 aaKnown RBP13.8□□□□□ -0.2
SNX6-207ENST00000556303 CLDN3O15551 220 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 POU2F2P09086 479 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 FGFR3P22607 806 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 HOXA9P31269 272 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 CLCNKBP51801 687 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 PTPAQ15257 358 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 PSMD5Q16401 504 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 UVSSAQ2YD98 709 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 ANKS3Q6ZW76 656 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 KREMEN2Q8NCW0 462 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 RASSF8Q8NHQ8 419 aa13.79□□□□□ -0.2
SNX6-207ENST00000556303 PBXIP1Q96AQ6 731 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms