RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	HOXD13	P35453	343 aa		13.1	□□□□□ -0.31
TMPO-212	ENST00000556029	GCLM	P48507	274 aa		13.1	□□□□□ -0.31
TMPO-212	ENST00000556029	SPIRE1	Q08AE8	756 aa		13.1	□□□□□ -0.31
TMPO-212	ENST00000556029	ZNF844	Q08AG5	666 aa		13.1	□□□□□ -0.31
TMPO-212	ENST00000556029	CEP128	Q6ZU80	1094 aa		13.1	□□□□□ -0.31
TMPO-212	ENST00000556029	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.1	□□□□□ -0.31
TMPO-212	ENST00000556029	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.1	□□□□□ -0.31
TMPO-212	ENST00000556029	NME8	Q8N427	588 aa		13.1	□□□□□ -0.31
TMPO-212	ENST00000556029	PIP4K2C	Q8TBX8	421 aa		13.1	□□□□□ -0.31
TMPO-212	ENST00000556029	KCNV2	Q8TDN2	545 aa		13.1	□□□□□ -0.31
TMPO-212	ENST00000556029	MKL1	Q969V6	931 aa		13.1	□□□□□ -0.31
TMPO-212	ENST00000556029	FAM198A	Q9UFP1	575 aa		13.1	□□□□□ -0.31
TMPO-212	ENST00000556029	MAP1B	P46821	2468 aa	Known RBP	13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	PPP1R12A	O14974	1030 aa	Predicted RBP	13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	TMEM253	P0C7T8	217 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	CNGA1	P29973	690 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	NSF	P46459	744 aa	Known RBP	13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	MAP7	Q14244	749 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	SCYL1	Q96KG9	808 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	IWS1	Q96ST2	819 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	C1orf112	Q9NSG2	853 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	TMEM59L	Q9UK28	342 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	URB1	O60287	2271 aa	Known RBP	13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	GTPBP10	A4D1E9	387 aa	Known RBP	13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	ZBTB39	O15060	712 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	EIF3D	O15371	548 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	NPEPPS	P55786	919 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	SESTD1	Q86VW0	696 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	EIF1AD	Q8N9N8	165 aa	Known RBP	13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	NLRP4	Q96MN2	994 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	MBOAT7	Q96N66	472 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	APOL6	Q9BWW8	343 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	NEUROG2	Q9H2A3	272 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	TUFT1	Q9NNX1	390 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	OLFML3	Q9NRN5	406 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	CA4	P22748	312 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	KRT81	Q14533	505 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	TAF11	Q15544	211 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	TMEM259	Q4ZIN3	620 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	SGO2	Q562F6	1265 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	C4orf50	Q6ZRC1	276 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	LNX1	Q8TBB1	728 aa	Predicted RBP	13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	P3H4	Q92791	437 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	MRPL46	Q9H2W6	279 aa	Known RBP	13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	DNAJC18	Q9H819	358 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	APEX2	Q9UBZ4	518 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	PPP1R9A	Q9ULJ8	1098 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	DIS3	Q9Y2L1	958 aa	Known RBP	13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	CFLAR	O15519	480 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	TGFB1I1	O43294	461 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	FAM149B1	Q96BN6	582 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	SAAL1	Q96ER3	474 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	CYFIP2	Q96F07	1278 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	NACA2	Q9H009	215 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	SPON1	Q9HCB6	807 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	SIX2	Q9NPC8	291 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	FAF1	Q9UNN5	650 aa	Predicted RBP	13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	SLC4A7	Q9Y6M7	1214 aa		13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.09	□□□□□ -0.31
TMPO-212	ENST00000556029	CNTRL	Q7Z7A1	2325 aa		13.08	□□□□□ -0.31
TMPO-212	ENST00000556029	FLT3	P36888	993 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	CAP2	P40123	477 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	SATB1	Q01826	763 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	BMT2	Q1RMZ1	405 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	MYLK4	Q86YV6	388 aa	Predicted RBP	13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	PPP4R1	Q8TF05	950 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	ACCS	Q96QU6	501 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	THAP2	Q9H0W7	228 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	PASK	Q96RG2	1323 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	WNT10B	O00744	389 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	CP	P00450	1065 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	INHBA	P08476	426 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	HNRNPH1	P31943	449 aa	Known RBP	13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	PDE6C	P51160	858 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	DBN1	Q16643	649 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	CALN1	Q9BXU9	219 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	NRBP2	Q9NSY0	501 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	NOD1	Q9Y239	953 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	RASGRF2	O14827	1237 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	STK10	O94804	968 aa	Known RBP	13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	MYC	P01106	439 aa	Predicted RBP	13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	QARS	P47897	775 aa	Known RBP	13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	EIF3B	P55884	814 aa	Known RBP	13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	JAM2	P57087	298 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	BASP1	P80723	227 aa	Known RBP	13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	BBS9	Q3SYG4	887 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	ZNF394	Q53GI3	561 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	PLA2G4F	Q68DD2	849 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	RFX8	Q6ZV50	586 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	NSUN6	Q8TEA1	469 aa	Known RBP	13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	P2RX7	Q99572	595 aa	Known RBP	13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	MKNK1	Q9BUB5	465 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	HEMGN	Q9BXL5	484 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	AGPAT3	Q9NRZ7	376 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	SEL1L	Q9UBV2	794 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	VAV3	Q9UKW4	847 aa		13.08	□□□□□ -0.32
TMPO-212	ENST00000556029	GPC4	O75487	556 aa		13.07	□□□□□ -0.32
TMPO-212	ENST00000556029	SLITRK3	O94933	977 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms