RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 PORP16435 677 aaPredicted RBP11□□□□□ -0.65
EFCAB11-208ENST00000555872 IL15P40933 162 aaPredicted RBP11□□□□□ -0.65
EFCAB11-208ENST00000555872 HAAOP46952 286 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 SNX16P57768 344 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 TBL3Q12788 808 aaKnown RBP11□□□□□ -0.65
EFCAB11-208ENST00000555872 RALGDSQ12967 914 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 TTC38Q5R3I4 469 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 DNAJC9Q8WXX5 260 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 ETNK1Q9HBU6 452 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 FGFR1OP2Q9NVK5 253 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11□□□□□ -0.65
EFCAB11-208ENST00000555872 PPP1R9AQ9ULJ8 1098 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 PITPNM2Q9BZ72 1349 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 BCORQ6W2J9 1755 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 ZW10O43264 779 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 CDK4P11802 303 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 ADORA1P30542 326 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 KRT2P35908 639 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 IL6STP40189 918 aaPredicted RBP11□□□□□ -0.65
EFCAB11-208ENST00000555872 ANKRD40Q6AI12 368 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 FAM9CQ8IZT9 166 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 LSMEM2Q8N112 164 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 SCAIQ8N9R8 606 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 RBM14Q96PK6 669 aaKnown RBP11□□□□□ -0.65
EFCAB11-208ENST00000555872 GOLPH3Q9H4A6 298 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 AZI2Q9H6S1 392 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 VCX3AQ9NNX9 186 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 SLC4A4Q9Y6R1 1079 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 TAF1LQ8IZX4 1826 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 MYH14Q7Z406 1995 aaKnown RBP11□□□□□ -0.65
EFCAB11-208ENST00000555872 BMP15O95972 392 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 TPBGLP0DKB5 382 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 CD9P21926 228 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 GSTT1P30711 240 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 TNNI2P48788 182 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 EIF3BP55884 814 aaKnown RBP11□□□□□ -0.65
EFCAB11-208ENST00000555872 TRIM28Q13263 835 aaKnown RBP11□□□□□ -0.65
EFCAB11-208ENST00000555872 GNA13Q14344 377 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 LRRC14Q15048 493 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 IL17AQ16552 155 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 CCDC81Q6ZN84 652 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 VASH1Q7L8A9 365 aaPredicted RBP11□□□□□ -0.65
EFCAB11-208ENST00000555872 SH3BP5LQ7L8J4 393 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 NLRP9Q7RTR0 991 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 EPS8L3Q8TE67 593 aaKnown RBP11□□□□□ -0.65
EFCAB11-208ENST00000555872 STK32AQ8WU08 396 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 UTP4Q969X6 686 aaKnown RBP11□□□□□ -0.65
EFCAB11-208ENST00000555872 IFT43Q96FT9 208 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 TRAPPC9Q96Q05 1148 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 PLIN2Q99541 437 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 CELF4Q9BZC1 486 aaKnown RBP11□□□□□ -0.65
EFCAB11-208ENST00000555872 CARD9Q9H257 536 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 TUT1Q9H6E5 874 aaKnown RBP11□□□□□ -0.65
EFCAB11-208ENST00000555872 SCOCQ9UIL1 159 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 RASAL2Q9UJF2 1139 aa11□□□□□ -0.65
EFCAB11-208ENST00000555872 RGS16O15492 202 aaPredicted RBP10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 CYTH3O43739 400 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 PEX11AO75192 247 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 WFS1O76024 890 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 DDHD2O94830 711 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 STAMBPO95630 424 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 SPATA31D3P0C874 917 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 PLCG2P16885 1265 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 MCM7P33993 719 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 PTDSS1P48651 473 aaKnown RBP10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 NR2C2P49116 596 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 ATP2C1P98194 919 aaPredicted RBP10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 TUBA3CQ13748 450 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 RPS6KA1Q15418 735 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 C15orf59Q2T9L4 293 aaPredicted RBP10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 ASTE1Q2TB18 679 aaPredicted RBP10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 SYDE2Q5VT97 1194 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 ZNF600Q6ZNG1 722 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 SPATA31D4Q6ZUB0 917 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 MGARPQ8TDB4 240 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 PIGOQ8TEQ8 1089 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 SCFD2Q8WU76 684 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 DPF3Q92784 378 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 ACAP3Q96P50 834 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 NUDCD1Q96RS6 583 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 CLIC5Q9NZA1 410 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 MKL2Q9ULH7 1088 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 MYH2Q9UKX2 1941 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 LOC102724428A0A0B4J2F2 783 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 TCP11X1B4DZS4 312 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 OAS1P00973 400 aaKnown RBP10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 ITGA4P13612 1032 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 ACADSP16219 412 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 ALAS2P22557 587 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 EVI2BP34910 448 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 SIK1P57059 783 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 AP2B1P63010 937 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 KLHL30Q0D2K2 578 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 NAB2Q15742 525 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 ZSCAN29Q8IWY8 852 aaPredicted RBP10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 AADATQ8N5Z0 425 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 RAB3IPQ96QF0 476 aaPredicted RBP10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 SMC6Q96SB8 1091 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 BHMT2Q9H2M3 363 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 SPC25Q9HBM1 224 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms