RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 CDH22Q9UJ99 828 aa13.81□□□□□ -0.2
CHGA-203ENST00000553866 HCFC2Q9Y5Z7 792 aa13.81□□□□□ -0.2
CHGA-203ENST00000553866 BDP1A6H8Y1 2624 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 SMIM28A0A1B0GU29 152 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 ANKRD63C9JTQ0 380 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 SOD2P04179 222 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 PDIA4P13667 645 aaKnown RBP13.8□□□□□ -0.2
CHGA-203ENST00000553866 EPCAMP16422 314 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 TNFSF9P41273 254 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 CASP5P51878 434 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 GTF2BQ00403 316 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 MCL1Q07820 350 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 KCNA1Q09470 495 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 NOLC1Q14978 699 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHGA-203ENST00000553866 KIAA0319Q5VV43 1072 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 SYCE2Q6PIF2 218 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 ZPBP2Q6X784 338 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 TMEM184AQ6ZMB5 413 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 FAM178BQ8IXR5 827 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 SMRP1Q8NCR6 262 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 SLC22A17Q8WUG5 538 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 DHX58Q96C10 678 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 SNX27Q96L92 541 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 COLEC11Q9BWP8 271 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 STRA6Q9BX79 667 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 S1PR5Q9H228 398 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 RCOR1Q9UKL0 485 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 ADAM28Q9UKQ2 775 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 IRAK3Q9Y616 596 aa13.8□□□□□ -0.2
CHGA-203ENST00000553866 PLXNA3P51805 1871 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 PDCD11Q14690 1871 aaKnown RBP13.79□□□□□ -0.2
CHGA-203ENST00000553866 CARNS1A5YM72 827 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 FAM189A1O60320 539 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 PPP1R37O75864 691 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 PIGRP01833 764 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 CNPP09543 421 aaKnown RBP13.79□□□□□ -0.2
CHGA-203ENST00000553866 CASP1P29466 404 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 CLCNKBP51801 687 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 COASYQ13057 564 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 SMAD4Q13485 552 aaKnown RBP13.79□□□□□ -0.2
CHGA-203ENST00000553866 HSP90AA2PQ14568 343 aaPredicted RBP13.79□□□□□ -0.2
CHGA-203ENST00000553866 SLC10A6Q3KNW5 377 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 ANKRD54Q6NXT1 300 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 FUT10Q6P4F1 479 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 ZNF720Q7Z2F6 126 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 C12orf76Q8N812 135 aaPredicted RBP13.79□□□□□ -0.2
CHGA-203ENST00000553866 C3orf58Q8NDZ4 430 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 GLIS3Q8NEA6 775 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 HPS3Q969F9 1004 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 C18orf25Q96B23 403 aaPredicted RBP13.79□□□□□ -0.2
CHGA-203ENST00000553866 BICD1Q96G01 975 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 ACAP3Q96P50 834 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 KLHL5Q96PQ7 755 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 CCDC94Q9BW85 323 aaPredicted RBP13.79□□□□□ -0.2
CHGA-203ENST00000553866 CHST7Q9NS84 486 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 KCNG1Q9UIX4 513 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 CITO14578 2027 aa13.79□□□□□ -0.2
CHGA-203ENST00000553866 VWA8A3KMH1 1905 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 TCHHQ07283 1943 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 FRMD3A2A2Y4 597 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 H0YCG3 227 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 TNFRSF10AO00220 468 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 CLDN3O15551 220 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 TADA2AO75478 443 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 CXCL8P10145 99 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 MYBP10242 640 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 IDEP14735 1019 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 ME1P48163 572 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 LIG4P49917 911 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 SPAG1Q07617 926 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 SMAD2Q15796 467 aaKnown RBP13.78□□□□□ -0.2
CHGA-203ENST00000553866 MAP4K3Q8IVH8 894 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 KCNG4Q8TDN1 519 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 ST6GALNAC4Q9H4F1 302 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 KBTBD4Q9NVX7 518 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 CNTN3Q9P232 1028 aa13.78□□□□□ -0.2
CHGA-203ENST00000553866 USP15Q9Y4E8 981 aaPredicted RBP13.78□□□□□ -0.2
CHGA-203ENST00000553866 A0A0B4J269 797 aa13.77□□□□□ -0.21
CHGA-203ENST00000553866 HNRNPDLO14979 420 aaKnown RBP13.77□□□□□ -0.21
CHGA-203ENST00000553866 TEX28O15482 410 aa13.77□□□□□ -0.21
CHGA-203ENST00000553866 POLR2DO15514 142 aaKnown RBP13.77□□□□□ -0.21
CHGA-203ENST00000553866 NR1I2O75469 434 aa13.77□□□□□ -0.21
CHGA-203ENST00000553866 KCNE1P15382 129 aa13.77□□□□□ -0.21
CHGA-203ENST00000553866 RPL17P18621 184 aaKnown RBP13.77□□□□□ -0.21
CHGA-203ENST00000553866 MATR3P43243 847 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHGA-203ENST00000553866 GLUD2P49448 558 aa13.77□□□□□ -0.21
CHGA-203ENST00000553866 YARSP54577 528 aaKnown RBP13.77□□□□□ -0.21
CHGA-203ENST00000553866 DSG1Q02413 1049 aa13.77□□□□□ -0.21
CHGA-203ENST00000553866 ZP2Q05996 745 aa13.77□□□□□ -0.21
CHGA-203ENST00000553866 UPP1Q16831 310 aa13.77□□□□□ -0.21
CHGA-203ENST00000553866 PUS10Q3MIT2 529 aaKnown RBP13.77□□□□□ -0.21
CHGA-203ENST00000553866 RTP2Q5QGT7 225 aa13.77□□□□□ -0.21
CHGA-203ENST00000553866 RESP18Q5W5W9 173 aa13.77□□□□□ -0.21
CHGA-203ENST00000553866 ATL3Q6DD88 541 aa13.77□□□□□ -0.21
CHGA-203ENST00000553866 PRSS55Q6UWB4 352 aaPredicted RBP13.77□□□□□ -0.21
CHGA-203ENST00000553866 APBB1IPQ7Z5R6 666 aaPredicted RBP13.77□□□□□ -0.21
CHGA-203ENST00000553866 GRAMD1CQ8IYS0 662 aa13.77□□□□□ -0.21
CHGA-203ENST00000553866 LEO1Q8WVC0 666 aaPredicted RBP13.77□□□□□ -0.21
CHGA-203ENST00000553866 MRPL17Q9NRX2 175 aaKnown RBP13.77□□□□□ -0.21
CHGA-203ENST00000553866 PANK4Q9NVE7 773 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms