RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 HCFC2Q9Y5Z7 792 aa25.83■■□□□ 1.73
TDP1-205ENST00000553527 CLDN3O15551 220 aa25.82■■□□□ 1.72
TDP1-205ENST00000553527 TOM1L1O75674 476 aa25.82■■□□□ 1.72
TDP1-205ENST00000553527 SOD2P04179 222 aa25.82■■□□□ 1.72
TDP1-205ENST00000553527 PROZP22891 400 aa25.82■■□□□ 1.72
TDP1-205ENST00000553527 SSTR3P32745 418 aaPredicted RBP25.82■■□□□ 1.72
TDP1-205ENST00000553527 HSP90AA2PQ14568 343 aaPredicted RBP25.82■■□□□ 1.72
TDP1-205ENST00000553527 KIAA1841Q6NSI8 718 aa25.82■■□□□ 1.72
TDP1-205ENST00000553527 STAMQ92783 540 aa25.82■■□□□ 1.72
TDP1-205ENST00000553527 GPR62Q9BZJ7 368 aa25.82■■□□□ 1.72
TDP1-205ENST00000553527 GDPD2Q9HCC8 539 aa25.82■■□□□ 1.72
TDP1-205ENST00000553527 STK39Q9UEW8 545 aa25.82■■□□□ 1.72
TDP1-205ENST00000553527 ADAM28Q9UKQ2 775 aa25.82■■□□□ 1.72
TDP1-205ENST00000553527 MUC3AQ02505 3323 aa25.81■■□□□ 1.72
TDP1-205ENST00000553527 ABLIM1O14639 778 aa25.81■■□□□ 1.72
TDP1-205ENST00000553527 URODP06132 367 aa25.81■■□□□ 1.72
TDP1-205ENST00000553527 KLRC2P26717 231 aa25.81■■□□□ 1.72
TDP1-205ENST00000553527 LIG4P49917 911 aa25.81■■□□□ 1.72
TDP1-205ENST00000553527 COASYQ13057 564 aa25.81■■□□□ 1.72
TDP1-205ENST00000553527 KCNC3Q14003 757 aa25.81■■□□□ 1.72
TDP1-205ENST00000553527 NOLC1Q14978 699 aaKnown RBP eCLIP25.81■■□□□ 1.72
TDP1-205ENST00000553527 ZC2HC1CQ53FD0 456 aaPredicted RBP25.81■■□□□ 1.72
TDP1-205ENST00000553527 ANKRD54Q6NXT1 300 aa25.81■■□□□ 1.72
TDP1-205ENST00000553527 FUT10Q6P4F1 479 aa25.81■■□□□ 1.72
TDP1-205ENST00000553527 ZPBP2Q6X784 338 aa25.81■■□□□ 1.72
TDP1-205ENST00000553527 EMILIN2Q9BXX0 1053 aa25.81■■□□□ 1.72
TDP1-205ENST00000553527 CD320Q9NPF0 282 aa25.81■■□□□ 1.72
TDP1-205ENST00000553527 TOPORSQ9NS56 1045 aaPredicted RBP25.81■■□□□ 1.72
TDP1-205ENST00000553527 TBC1D7Q9P0N9 293 aa25.81■■□□□ 1.72
TDP1-205ENST00000553527 PCDHA7Q9UN72 937 aa25.81■■□□□ 1.72
TDP1-205ENST00000553527 IRAK3Q9Y616 596 aa25.81■■□□□ 1.72
TDP1-205ENST00000553527 HNRNPDLO14979 420 aaKnown RBP25.8■■□□□ 1.72
TDP1-205ENST00000553527 CNPP09543 421 aaKnown RBP25.8■■□□□ 1.72
TDP1-205ENST00000553527 IDEP14735 1019 aa25.8■■□□□ 1.72
TDP1-205ENST00000553527 SMAD2Q15796 467 aaKnown RBP25.8■■□□□ 1.72
TDP1-205ENST00000553527 TMEM184AQ6ZMB5 413 aa25.8■■□□□ 1.72
TDP1-205ENST00000553527 SFR1Q86XK3 245 aa25.8■■□□□ 1.72
TDP1-205ENST00000553527 SMRP1Q8NCR6 262 aa25.8■■□□□ 1.72
TDP1-205ENST00000553527 CASP10Q92851 521 aa25.8■■□□□ 1.72
TDP1-205ENST00000553527 KLHL5Q96PQ7 755 aa25.8■■□□□ 1.72
TDP1-205ENST00000553527 HERC2P3Q9BVR0 1158 aa25.8■■□□□ 1.72
TDP1-205ENST00000553527 SMIM28A0A1B0GU29 152 aa25.79■■□□□ 1.72
TDP1-205ENST00000553527 KIF4AO95239 1232 aa25.79■■□□□ 1.72
TDP1-205ENST00000553527 EPCAMP16422 314 aa25.79■■□□□ 1.72
TDP1-205ENST00000553527 GLUD2P49448 558 aa25.79■■□□□ 1.72
TDP1-205ENST00000553527 NAB2Q15742 525 aa25.79■■□□□ 1.72
TDP1-205ENST00000553527 SHC4Q6S5L8 630 aa25.79■■□□□ 1.72
TDP1-205ENST00000553527 DHX58Q96C10 678 aa25.79■■□□□ 1.72
TDP1-205ENST00000553527 HAPLN2Q9GZV7 340 aa25.79■■□□□ 1.72
TDP1-205ENST00000553527 GOLGA2P5Q9HBQ8 144 aa25.79■■□□□ 1.72
TDP1-205ENST00000553527 USP15Q9Y4E8 981 aaPredicted RBP25.79■■□□□ 1.72
TDP1-205ENST00000553527 AXDND1Q5T1B0 1012 aaPredicted RBP25.78■■□□□ 1.72
TDP1-205ENST00000553527 SYCE2Q6PIF2 218 aa25.78■■□□□ 1.72
TDP1-205ENST00000553527 CEP57Q86XR8 500 aa25.78■■□□□ 1.72
TDP1-205ENST00000553527 GJD3Q8N144 294 aa25.78■■□□□ 1.72
TDP1-205ENST00000553527 DNAJC19Q96DA6 116 aa25.78■■□□□ 1.72
TDP1-205ENST00000553527 PPP1R10Q96QC0 940 aaKnown RBP25.78■■□□□ 1.72
TDP1-205ENST00000553527 FIZ1Q96SL8 496 aa25.78■■□□□ 1.72
TDP1-205ENST00000553527 MRPL44Q9H9J2 332 aaKnown RBP25.78■■□□□ 1.72
TDP1-205ENST00000553527 SSX2IPQ9Y2D8 614 aa25.78■■□□□ 1.72
TDP1-205ENST00000553527 SPDYE4A6NLX3 237 aa25.77■■□□□ 1.72
TDP1-205ENST00000553527 LILRB3O75022 631 aa25.77■■□□□ 1.72
TDP1-205ENST00000553527 MYBP10242 640 aa25.77■■□□□ 1.72
TDP1-205ENST00000553527 CLCNKBP51801 687 aa25.77■■□□□ 1.72
TDP1-205ENST00000553527 MCL1Q07820 350 aa25.77■■□□□ 1.72
TDP1-205ENST00000553527 USP41Q3LFD5 358 aa25.77■■□□□ 1.72
TDP1-205ENST00000553527 KIAA0319Q5VV43 1072 aa25.77■■□□□ 1.72
TDP1-205ENST00000553527 KANK3Q6NY19 840 aa25.77■■□□□ 1.72
TDP1-205ENST00000553527 ALKAL1Q6UXT8 129 aa25.77■■□□□ 1.72
TDP1-205ENST00000553527 GLYCTKQ8IVS8 523 aa25.77■■□□□ 1.72
TDP1-205ENST00000553527 C12orf76Q8N812 135 aaPredicted RBP25.77■■□□□ 1.72
TDP1-205ENST00000553527 RIN2Q8WYP3 895 aaPredicted RBP25.77■■□□□ 1.72
TDP1-205ENST00000553527 ZMAT2Q96NC0 199 aaKnown RBP25.77■■□□□ 1.72
TDP1-205ENST00000553527 B3GAT3O94766 335 aa25.76■■□□□ 1.71
TDP1-205ENST00000553527 EFEMP2O95967 443 aa25.76■■□□□ 1.71
TDP1-205ENST00000553527 IGFBP6P24592 240 aaPredicted RBP25.76■■□□□ 1.71
TDP1-205ENST00000553527 GTF2BQ00403 316 aa25.76■■□□□ 1.71
TDP1-205ENST00000553527 SLC10A6Q3KNW5 377 aa25.76■■□□□ 1.71
TDP1-205ENST00000553527 HERC4Q5GLZ8 1057 aaPredicted RBP25.76■■□□□ 1.71
TDP1-205ENST00000553527 FAM171A1Q5VUB5 890 aa25.76■■□□□ 1.71
TDP1-205ENST00000553527 ZNF720Q7Z2F6 126 aa25.76■■□□□ 1.71
TDP1-205ENST00000553527 PPFIBP1Q86W92 1011 aa25.76■■□□□ 1.71
TDP1-205ENST00000553527 RNF168Q8IYW5 571 aaPredicted RBP25.76■■□□□ 1.71
TDP1-205ENST00000553527 SLC22A17Q8WUG5 538 aa25.76■■□□□ 1.71
TDP1-205ENST00000553527 SNX27Q96L92 541 aa25.76■■□□□ 1.71
TDP1-205ENST00000553527 S1PR5Q9H228 398 aa25.76■■□□□ 1.71
TDP1-205ENST00000553527 CHST7Q9NS84 486 aa25.76■■□□□ 1.71
TDP1-205ENST00000553527 CDH22Q9UJ99 828 aa25.76■■□□□ 1.71
TDP1-205ENST00000553527 PLXNA3P51805 1871 aa25.76■■□□□ 1.71
TDP1-205ENST00000553527 PDCD11Q14690 1871 aaKnown RBP25.76■■□□□ 1.71
TDP1-205ENST00000553527 SF3B1O75533 1304 aaKnown RBP eCLIP25.75■■□□□ 1.71
TDP1-205ENST00000553527 TNFSF9P41273 254 aa25.75■■□□□ 1.71
TDP1-205ENST00000553527 DSG1Q02413 1049 aa25.75■■□□□ 1.71
TDP1-205ENST00000553527 ZP2Q05996 745 aa25.75■■□□□ 1.71
TDP1-205ENST00000553527 SOX4Q06945 474 aaPredicted RBP25.75■■□□□ 1.71
TDP1-205ENST00000553527 SPAG1Q07617 926 aa25.75■■□□□ 1.71
TDP1-205ENST00000553527 ADHFE1Q8IWW8 467 aa25.75■■□□□ 1.71
TDP1-205ENST00000553527 C18orf25Q96B23 403 aaPredicted RBP25.75■■□□□ 1.71
TDP1-205ENST00000553527 IKZF4Q9H2S9 585 aa25.75■■□□□ 1.71
TDP1-205ENST00000553527 PANK4Q9NVE7 773 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms