RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 IGSF21Q96ID5 467 aa9.76□□□□□ -0.85
ATP2B1-207ENST00000550716 RIPOR3Q96MK2 946 aa9.76□□□□□ -0.85
ATP2B1-207ENST00000550716 NLRP4Q96MN2 994 aa9.76□□□□□ -0.85
ATP2B1-207ENST00000550716 IPO9Q96P70 1041 aaKnown RBP9.76□□□□□ -0.85
ATP2B1-207ENST00000550716 MRPL9Q9BYD2 267 aaKnown RBP9.76□□□□□ -0.85
ATP2B1-207ENST00000550716 GCOM2Q9BZD3 368 aaPredicted RBP9.76□□□□□ -0.85
ATP2B1-207ENST00000550716 GBP3Q9H0R5 595 aa9.76□□□□□ -0.85
ATP2B1-207ENST00000550716 MINDY3Q9H8M7 445 aa9.76□□□□□ -0.85
ATP2B1-207ENST00000550716 IFT122Q9HBG6 1241 aa9.76□□□□□ -0.85
ATP2B1-207ENST00000550716 GJB4Q9NTQ9 266 aa9.76□□□□□ -0.85
ATP2B1-207ENST00000550716 FAM105AQ9NUU6 356 aa9.76□□□□□ -0.85
ATP2B1-207ENST00000550716 VAV3Q9UKW4 847 aa9.76□□□□□ -0.85
ATP2B1-207ENST00000550716 KCNJ14Q9UNX9 436 aa9.76□□□□□ -0.85
ATP2B1-207ENST00000550716 CDK2AP1O14519 115 aa9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 DDHD2O94830 711 aa9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 SSBP05455 408 aaKnown RBP eCLIP9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 CTSAP10619 480 aa9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 SFPQP23246 707 aaKnown RBP eCLIP9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 ALDH7A1P49419 539 aaKnown RBP9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 STK3Q13188 491 aa9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 NOMO2Q5JPE7 1267 aa9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 UBXN11Q5T124 520 aa9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 KIAA1841Q6NSI8 718 aa9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 CATSPER4Q7RTX7 472 aa9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 DDX53Q86TM3 631 aaKnown RBP9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 BLIDQ8IZY5 108 aa9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 DAGLBQ8NCG7 672 aa9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 RDM1Q8NG50 284 aa9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 TRAIPQ9BWF2 469 aa9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 SH3GLB2Q9NR46 395 aa9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 DACT1Q9NYF0 836 aa9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 SCHIP1Q9P0W5 487 aaPredicted RBP9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 SORCS3Q9UPU3 1222 aa9.75□□□□□ -0.85
ATP2B1-207ENST00000550716 WDR87Q6ZQQ6 2873 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 MYH9P35579 1960 aaKnown RBP9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 F8W810 466 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 ZBTB39O15060 712 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 THBS1P07996 1170 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 HOXA11P31270 313 aaPredicted RBP9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 MTHFRP42898 656 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 EPHA4P54764 986 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 ITIH3Q06033 890 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 SSRP1Q08945 709 aaKnown RBP9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 MTMR3Q13615 1198 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 LETM2Q2VYF4 491 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 EARS2Q5JPH6 523 aaKnown RBP9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 CES5AQ6NT32 575 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 GLB1LQ6UWU2 654 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 RUFY3Q7L099 469 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 ZNF410Q86VK4 478 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 ZNF295-AS1Q8N0V1 137 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 SIX5Q8N196 739 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 ATOH1Q92858 354 aaPredicted RBP9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 TMEM143Q96AN5 459 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 NECTIN4Q96NY8 510 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 KCNMB3Q9NPA1 279 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 CYP26B1Q9NR63 512 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 CHST12Q9NRB3 414 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 AGPAT5Q9NUQ2 364 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 MARCH5Q9NX47 278 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 DDX25Q9UHL0 483 aaKnown RBP9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 NR2E1Q9Y466 385 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 PCDHB2Q9Y5E7 798 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 COL4A3BPQ9Y5P4 624 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 IRAK3Q9Y616 596 aa9.74□□□□□ -0.85
ATP2B1-207ENST00000550716 FAM181BA6NEQ2 426 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 N4BP1O75113 896 aaKnown RBP9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 ZNF623O75123 536 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 DEXIO95424 95 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 POMCP01189 267 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 CNPP09543 421 aaKnown RBP9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 MYBP10242 640 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 DNM2P50570 870 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 POLGP54098 1239 aaPredicted RBP9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 PSMC5P62195 406 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 RNASELQ05823 741 aaKnown RBP9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 NONOQ15233 471 aaKnown RBP eCLIP9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 RABEP1Q15276 862 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 TBCELQ5QJ74 424 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 CWF19L1Q69YN2 538 aaKnown RBP9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 MOXD1Q6UVY6 613 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 ASCL5Q7RTU5 278 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 TAS1R1Q7RTX1 841 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 SLC9A9Q8IVB4 645 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 ZDHHC14Q8IZN3 488 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 TDRD5Q8NAT2 981 aaKnown RBP9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 SMG8Q8ND04 991 aaKnown RBP9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 PRPF31Q8WWY3 499 aaKnown RBP9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 HAS1Q92839 578 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 SNX21Q969T3 373 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 KLHL5Q96PQ7 755 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 EIF2AQ9BY44 585 aaKnown RBP9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 DHX33Q9H6R0 707 aaKnown RBP9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 DZANK1Q9NVP4 752 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 RGL1Q9NZL6 768 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 WDR81Q562E7 1941 aa9.73□□□□□ -0.85
ATP2B1-207ENST00000550716 PLXNA3P51805 1871 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 GVINP1Q7Z2Y8 2422 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 SFI1A8K8P3 1242 aa9.72□□□□□ -0.85
ATP2B1-207ENST00000550716 SRGAP2CP0DJJ0 459 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms