RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 ACAP3Q96P50 834 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 PLIN2Q99541 437 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 RHOBTB2Q9BYZ6 727 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 POMKQ9H5K3 350 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 TSHZ2Q9NRE2 1034 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 USP20Q9Y2K6 914 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.49□□□□□ -0.41
BEST3-209ENST00000548658 CASTOR2A6NHX0 329 aa12.48□□□□□ -0.41
BEST3-209ENST00000548658 EDN1P05305 212 aa12.48□□□□□ -0.41
BEST3-209ENST00000548658 SYT1P21579 422 aa12.48□□□□□ -0.41
BEST3-209ENST00000548658 ZXDAP98168 799 aa12.48□□□□□ -0.41
BEST3-209ENST00000548658 RAD51AP2Q09MP3 1159 aa12.48□□□□□ -0.41
BEST3-209ENST00000548658 MPZL3Q6UWV2 235 aa12.48□□□□□ -0.41
BEST3-209ENST00000548658 BMP8AQ7Z5Y6 402 aa12.48□□□□□ -0.41
BEST3-209ENST00000548658 ZBTB33Q86T24 672 aa12.48□□□□□ -0.41
BEST3-209ENST00000548658 C12orf76Q8N812 135 aaPredicted RBP12.48□□□□□ -0.41
BEST3-209ENST00000548658 TMEM161BQ8NDZ6 487 aa12.48□□□□□ -0.41
BEST3-209ENST00000548658 RIN2Q8WYP3 895 aaPredicted RBP12.48□□□□□ -0.41
BEST3-209ENST00000548658 STAMQ92783 540 aa12.48□□□□□ -0.41
BEST3-209ENST00000548658 KCNN1Q92952 543 aa12.48□□□□□ -0.41
BEST3-209ENST00000548658 ACSF2Q96CM8 615 aaPredicted RBP12.48□□□□□ -0.41
BEST3-209ENST00000548658 TTPALQ9BTX7 342 aa12.48□□□□□ -0.41
BEST3-209ENST00000548658 TARS2Q9BW92 718 aaKnown RBP12.48□□□□□ -0.41
BEST3-209ENST00000548658 CCSER1Q9C0I3 900 aa12.48□□□□□ -0.41
BEST3-209ENST00000548658 CDT1Q9H211 546 aa12.48□□□□□ -0.41
BEST3-209ENST00000548658 ZSCAN16Q9H4T2 348 aaPredicted RBP12.48□□□□□ -0.41
BEST3-209ENST00000548658 CCDC39Q9UFE4 941 aa12.48□□□□□ -0.41
BEST3-209ENST00000548658 SMIM28A0A1B0GU29 152 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 TMEM189-UBE2V1I3L0A0 370 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 K7ELQ4 463 aaPredicted RBP12.47□□□□□ -0.41
BEST3-209ENST00000548658 CLDN3O15551 220 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 B3GAT3O94766 335 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 KRT18P05783 430 aaKnown RBP12.47□□□□□ -0.41
BEST3-209ENST00000548658 MAPTP10636 758 aaKnown RBP12.47□□□□□ -0.41
BEST3-209ENST00000548658 PROZP22891 400 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 DDIT3P35638 169 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 TXLNAP40222 546 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 NAB2Q15742 525 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 KYAT1Q16773 422 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 PTPN21Q16825 1174 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 XKR4Q5GH76 650 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 FAM171A1Q5VUB5 890 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 ALKAL1Q6UXT8 129 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 TRIM67Q6ZTA4 783 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 CCDC149Q6ZUS6 474 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 OTOP3Q7RTS5 596 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 UBALD2Q8IYN6 164 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 ZDHHC14Q8IZN3 488 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 TDRD5Q8NAT2 981 aaKnown RBP12.47□□□□□ -0.41
BEST3-209ENST00000548658 PIK3R5Q8WYR1 880 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 PPP1R10Q96QC0 940 aaKnown RBP12.47□□□□□ -0.41
BEST3-209ENST00000548658 PAAF1Q9BRP4 392 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 KCNH6Q9H252 994 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 MAN1C1Q9NR34 630 aa12.47□□□□□ -0.41
BEST3-209ENST00000548658 CCDC195A0A1B0GUA6 201 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 F8W810 466 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 TGM5O43548 720 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 FAM13AO94988 1023 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 KIF4AO95239 1232 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 KCNE1P15382 129 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 RPL9P32969 192 aaKnown RBP12.46□□□□□ -0.41
BEST3-209ENST00000548658 SIGLEC14Q08ET2 396 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 MTMR3Q13615 1198 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 NOLC1Q14978 699 aaKnown RBP eCLIP12.46□□□□□ -0.41
BEST3-209ENST00000548658 UPP1Q16831 310 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 ARSHQ5FYA8 562 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.46□□□□□ -0.41
BEST3-209ENST00000548658 TAS1R3Q7RTX0 852 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 HAUS6Q7Z4H7 955 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 GPBP1Q86WP2 473 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 CEP57Q86XR8 500 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 PALB2Q86YC2 1186 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 MYCT1Q8N699 235 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 LARP4BQ92615 738 aaKnown RBP12.46□□□□□ -0.41
BEST3-209ENST00000548658 RABGGTAQ92696 567 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 RAD54LQ92698 747 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 B3GALT6Q96L58 329 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 PLEKHA5Q9HAU0 1116 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 PARVGQ9HBI0 331 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 ZDHHC7Q9NXF8 308 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 SORCS3Q9UPU3 1222 aa12.46□□□□□ -0.41
BEST3-209ENST00000548658 SRPRBQ9Y5M8 271 aaKnown RBP12.46□□□□□ -0.41
BEST3-209ENST00000548658 MORC2Q9Y6X9 1032 aaPredicted RBP12.46□□□□□ -0.41
BEST3-209ENST00000548658 C2CD4DB7Z1M9 353 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 ABLIM1O14639 778 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 TRAK2O60296 914 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 TBCAO75347 108 aaKnown RBP12.45□□□□□ -0.42
BEST3-209ENST00000548658 PAPLNO95428 1278 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 WEE2P0C1S8 567 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 PLCG1P19174 1290 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 SP100P23497 879 aaPredicted RBP12.45□□□□□ -0.42
BEST3-209ENST00000548658 MATR3P43243 847 aaKnown RBP eCLIP12.45□□□□□ -0.42
BEST3-209ENST00000548658 CLCNKBP51801 687 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 ZNF131P52739 623 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 NCKAP1LP55160 1127 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 OSTNP61366 133 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 MCL1Q07820 350 aa12.45□□□□□ -0.42
BEST3-209ENST00000548658 DHX8Q14562 1220 aaKnown RBP12.45□□□□□ -0.42
BEST3-209ENST00000548658 KARSQ15046 597 aaKnown RBP12.45□□□□□ -0.42
BEST3-209ENST00000548658 PTPAQ15257 358 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms