RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 TBCKQ8TEA7 893 aa15.64■□□□□ 0.09
PTCH1-217ENST00000548420 FAM3CQ92520 227 aa15.64■□□□□ 0.09
PTCH1-217ENST00000548420 WASF1Q92558 559 aa15.64■□□□□ 0.09
PTCH1-217ENST00000548420 LRIG1Q96JA1 1093 aa15.64■□□□□ 0.09
PTCH1-217ENST00000548420 MBOAT7Q96N66 472 aa15.64■□□□□ 0.09
PTCH1-217ENST00000548420 SDF4Q9BRK5 362 aa15.64■□□□□ 0.09
PTCH1-217ENST00000548420 VPS45Q9NRW7 570 aa15.64■□□□□ 0.09
PTCH1-217ENST00000548420 GJB4Q9NTQ9 266 aa15.64■□□□□ 0.09
PTCH1-217ENST00000548420 FAN1Q9Y2M0 1017 aa15.64■□□□□ 0.09
PTCH1-217ENST00000548420 COL1A2P08123 1366 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 SPTA1P02549 2419 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 FAM221BA6H8Z2 402 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 ECI2O75521 394 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 CCNE2O96020 404 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 ALDH2P05091 517 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 XBP1P17861 261 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 RPL17P18621 184 aaKnown RBP15.63■□□□□ 0.09
PTCH1-217ENST00000548420 GLUD2P49448 558 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 DSG1Q02413 1049 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 RABEP1Q15276 862 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 ZNF484Q5JVG2 852 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 MOXD1Q6UVY6 613 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 GLB1LQ6UWU2 654 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 ABHD15Q6UXT9 468 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 METTL13Q8N6R0 699 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 DEFB124Q8NES8 71 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 ING5Q8WYH8 240 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 DNASE1L2Q92874 299 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 ZSCAN31Q96LW9 406 aaPredicted RBP15.63■□□□□ 0.09
PTCH1-217ENST00000548420 LLPHQ9BRT6 129 aaKnown RBP15.63■□□□□ 0.09
PTCH1-217ENST00000548420 TBC1D22BQ9NU19 505 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 STK39Q9UEW8 545 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 PCDHGA5Q9Y5G8 931 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 SHROOM3Q8TF72 1996 aa15.63■□□□□ 0.09
PTCH1-217ENST00000548420 CDX4O14627 284 aaPredicted RBP15.62■□□□□ 0.09
PTCH1-217ENST00000548420 JAK2O60674 1132 aa15.62■□□□□ 0.09
PTCH1-217ENST00000548420 DARSP14868 501 aaKnown RBP15.62■□□□□ 0.09
PTCH1-217ENST00000548420 PTGDRQ13258 359 aa15.62■□□□□ 0.09
PTCH1-217ENST00000548420 GRM2Q14416 872 aa15.62■□□□□ 0.09
PTCH1-217ENST00000548420 Q4G0T1 1027 aa15.62■□□□□ 0.09
PTCH1-217ENST00000548420 PRR16Q569H4 304 aa15.62■□□□□ 0.09
PTCH1-217ENST00000548420 DAB2IPQ5VWQ8 1189 aa15.62■□□□□ 0.09
PTCH1-217ENST00000548420 CACNA2D4Q7Z3S7 1137 aa15.62■□□□□ 0.09
PTCH1-217ENST00000548420 KRT25Q7Z3Z0 450 aa15.62■□□□□ 0.09
PTCH1-217ENST00000548420 GAB3Q8WWW8 586 aa15.62■□□□□ 0.09
PTCH1-217ENST00000548420 TNFRSF25Q93038 417 aa15.62■□□□□ 0.09
PTCH1-217ENST00000548420 TBC1D32Q96NH3 1257 aa15.62■□□□□ 0.09
PTCH1-217ENST00000548420 ZNF577Q9BSK1 485 aa15.62■□□□□ 0.09
PTCH1-217ENST00000548420 CHST7Q9NS84 486 aa15.62■□□□□ 0.09
PTCH1-217ENST00000548420 HCFC1R1Q9NWW0 138 aa15.62■□□□□ 0.09
PTCH1-217ENST00000548420 LNP1A1A4G5 178 aa15.61■□□□□ 0.09
PTCH1-217ENST00000548420 CCL16O15467 120 aa15.61■□□□□ 0.09
PTCH1-217ENST00000548420 C1RP00736 705 aa15.61■□□□□ 0.09
PTCH1-217ENST00000548420 HOXA6P31267 233 aa15.61■□□□□ 0.09
PTCH1-217ENST00000548420 PXNP49023 591 aaPredicted RBP15.61■□□□□ 0.09
PTCH1-217ENST00000548420 SLC26A2P50443 739 aa15.61■□□□□ 0.09
PTCH1-217ENST00000548420 SCAPQ12770 1279 aa15.61■□□□□ 0.09
PTCH1-217ENST00000548420 AGMOQ6ZNB7 445 aa15.61■□□□□ 0.09
PTCH1-217ENST00000548420 CCDC60Q8IWA6 550 aaPredicted RBP15.61■□□□□ 0.09
PTCH1-217ENST00000548420 OXER1Q8TDS5 423 aa15.61■□□□□ 0.09
PTCH1-217ENST00000548420 CRELD1Q96HD1 420 aa15.61■□□□□ 0.09
PTCH1-217ENST00000548420 TMEM175Q9BSA9 504 aa15.61■□□□□ 0.09
PTCH1-217ENST00000548420 TRAIPQ9BWF2 469 aa15.61■□□□□ 0.09
PTCH1-217ENST00000548420 DACT1Q9NYF0 836 aa15.61■□□□□ 0.09
PTCH1-217ENST00000548420 SSX2IPQ9Y2D8 614 aa15.61■□□□□ 0.09
PTCH1-217ENST00000548420 PRG3Q9Y2Y8 225 aaPredicted RBP15.61■□□□□ 0.09
PTCH1-217ENST00000548420 MSH4O15457 936 aa15.6■□□□□ 0.09
PTCH1-217ENST00000548420 FCARP24071 287 aa15.6■□□□□ 0.09
PTCH1-217ENST00000548420 GPC3P51654 580 aa15.6■□□□□ 0.09
PTCH1-217ENST00000548420 ZNF746Q6NUN9 644 aaPredicted RBP15.6■□□□□ 0.09
PTCH1-217ENST00000548420 LRRC71Q8N4P6 559 aa15.6■□□□□ 0.09
PTCH1-217ENST00000548420 RSPH1Q8WYR4 309 aa15.6■□□□□ 0.09
PTCH1-217ENST00000548420 SLC5A5Q92911 643 aa15.6■□□□□ 0.09
PTCH1-217ENST00000548420 MCRS1Q96EZ8 462 aa15.6■□□□□ 0.09
PTCH1-217ENST00000548420 RIT2Q99578 217 aa15.6■□□□□ 0.09
PTCH1-217ENST00000548420 UPF2Q9HAU5 1272 aaKnown RBP15.6■□□□□ 0.09
PTCH1-217ENST00000548420 RAI2Q9Y5P3 530 aa15.6■□□□□ 0.09
PTCH1-217ENST00000548420 URB1O60287 2271 aaKnown RBP15.6■□□□□ 0.09
PTCH1-217ENST00000548420 RPP40O75818 363 aaKnown RBP15.59■□□□□ 0.09
PTCH1-217ENST00000548420 PSMD10O75832 226 aa15.59■□□□□ 0.09
PTCH1-217ENST00000548420 CCNE1P24864 410 aa15.59■□□□□ 0.09
PTCH1-217ENST00000548420 INF2Q27J81 1249 aa15.59■□□□□ 0.09
PTCH1-217ENST00000548420 EARS2Q5JPH6 523 aaKnown RBP15.59■□□□□ 0.09
PTCH1-217ENST00000548420 PPP4R3AQ6IN85 833 aa15.59■□□□□ 0.09
PTCH1-217ENST00000548420 B3GNT9Q6UX72 402 aa15.59■□□□□ 0.09
PTCH1-217ENST00000548420 MAP4K3Q8IVH8 894 aa15.59■□□□□ 0.09
PTCH1-217ENST00000548420 CCDC83Q8IWF9 413 aa15.59■□□□□ 0.09
PTCH1-217ENST00000548420 CHCHD4Q8N4Q1 142 aa15.59■□□□□ 0.09
PTCH1-217ENST00000548420 ZC3H10Q96K80 434 aaKnown RBP15.59■□□□□ 0.09
PTCH1-217ENST00000548420 BACH2Q9BYV9 841 aa15.59■□□□□ 0.09
PTCH1-217ENST00000548420 FAM105AQ9NUU6 356 aa15.59■□□□□ 0.09
PTCH1-217ENST00000548420 DNMT3BQ9UBC3 853 aaKnown RBP15.59■□□□□ 0.09
PTCH1-217ENST00000548420 FBXW11Q9UKB1 542 aa15.59■□□□□ 0.09
PTCH1-217ENST00000548420 AKT3Q9Y243 479 aa15.59■□□□□ 0.09
PTCH1-217ENST00000548420 PIAS3Q9Y6X2 628 aa15.59■□□□□ 0.09
PTCH1-217ENST00000548420 SPAARA0A1B0GVQ0 90 aa15.58■□□□□ 0.08
PTCH1-217ENST00000548420 ZNF623O75123 536 aa15.58■□□□□ 0.08
PTCH1-217ENST00000548420 TDP2O95551 362 aa15.58■□□□□ 0.08
PTCH1-217ENST00000548420 NR5A1Q13285 461 aa15.58■□□□□ 0.08
PTCH1-217ENST00000548420 EFCAB12Q6NXP0 572 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms