RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 E9PMD0 336 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 MAGEB2O15479 319 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 GAS2O43903 313 aaKnown RBP7.02□□□□□ -1.29
PRKDC-211ENST00000546304 ADAM23O75077 832 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 CAND2O75155 1236 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 FAM13AO94988 1023 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 KIF4AO95239 1232 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 EYA4O95677 639 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 RPLP2P05387 115 aaKnown RBP7.02□□□□□ -1.29
PRKDC-211ENST00000546304 SSBP05455 408 aaKnown RBP eCLIP7.02□□□□□ -1.29
PRKDC-211ENST00000546304 CTSHP09668 335 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 SELPP16109 830 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 CMA1P23946 247 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 KLRC1P26715 233 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 RBL2Q08999 1139 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 FAAP100Q0VG06 881 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 MTMR3Q13615 1198 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 NAALADL2Q58DX5 795 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 RRAGBQ5VZM2 374 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 ADALQ6DHV7 355 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 CLEC17AQ6ZS10 378 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 CACTIN-AS1Q8N1I8 211 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 LRRC71Q8N4P6 559 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 METTL13Q8N6R0 699 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 LINC01465Q8N7H1 131 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 FSIP1Q8NA03 581 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 RETREG2Q8NC44 543 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 MCPH1Q8NEM0 835 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 CAGE1Q8TC20 777 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 LARP4BQ92615 738 aaKnown RBP7.02□□□□□ -1.29
PRKDC-211ENST00000546304 RAD54LQ92698 747 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 MAP7D2Q96T17 732 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 JPH2Q9BR39 696 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-211ENST00000546304 PYM1Q9BRP8 204 aaKnown RBP7.02□□□□□ -1.29
PRKDC-211ENST00000546304 NOC4LQ9BVI4 516 aaKnown RBP7.02□□□□□ -1.29
PRKDC-211ENST00000546304 RUSC1Q9BVN2 902 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 HIPK3Q9H422 1215 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 DHX33Q9H6R0 707 aaKnown RBP7.02□□□□□ -1.29
PRKDC-211ENST00000546304 XPNPEP1Q9NQW7 623 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 BLOC1S4Q9NUP1 217 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 HPSEQ9Y251 543 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 PCDHA2Q9Y5H9 948 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 A0A087WWV3 80 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 IGKV6-21A0A0C4DH24 114 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 FAM237AA0A1B0GTK4 181 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 A0A1B0GVL5 298 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 KIAA0355O15063 1070 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 POLR2DO15514 142 aaKnown RBP7.01□□□□□ -1.29
PRKDC-211ENST00000546304 MAFO75444 373 aaPredicted RBP7.01□□□□□ -1.29
PRKDC-211ENST00000546304 PLA2G4BP0C869 781 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 XRCC6P12956 609 aaKnown RBP eCLIP7.01□□□□□ -1.29
PRKDC-211ENST00000546304 TMOD1P28289 359 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 THPOP40225 353 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 SLC12A3P55017 1021 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 NRG1Q02297 640 aaPredicted RBP7.01□□□□□ -1.29
PRKDC-211ENST00000546304 DRP2Q13474 957 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 BFSP2Q13515 415 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 TRIM71Q2Q1W2 868 aaKnown RBP7.01□□□□□ -1.29
PRKDC-211ENST00000546304 ZNF438Q7Z4V0 828 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 RPAINQ86UA6 219 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 RSPH3Q86UC2 560 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 GPBP1Q86WP2 473 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 EXOC8Q8IYI6 725 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 IQUBQ8NA54 791 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 DNAJB3Q8WWF6 145 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 PSPC1Q8WXF1 523 aaKnown RBP7.01□□□□□ -1.29
PRKDC-211ENST00000546304 DHX58Q96C10 678 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 ARID3AQ99856 593 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 POLR3FQ9H1D9 316 aaPredicted RBP7.01□□□□□ -1.29
PRKDC-211ENST00000546304 TNMDQ9H2S6 317 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 CUEDC2Q9H467 287 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 GOLPH3LQ9H4A5 285 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 SUGCTQ9HAC7 445 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 MAGEF1Q9HAY2 307 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 TMEM39AQ9NV64 488 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 KCND2Q9NZV8 630 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 TMEM63CQ9P1W3 806 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 PRKAG2Q9UGJ0 569 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 EGFL7Q9UHF1 273 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 KCNH3Q9ULD8 1083 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 AKT3Q9Y243 479 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 UMODL1Q5DID0 1318 aa7.01□□□□□ -1.29
PRKDC-211ENST00000546304 PTPRSQ13332 1948 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 TRIM43BA6NCK2 446 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 GOLGA6L22H0YM25 854 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 M0QZ92 97 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 TBCAO75347 108 aaKnown RBP7□□□□□ -1.29
PRKDC-211ENST00000546304 VTNP04004 478 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 CKBP12277 381 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 RAG1P15918 1043 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 CYP11B2P19099 503 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 GUCY2CP25092 1073 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 SYKP43405 635 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 RGS19P49795 217 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 DNM2P50570 870 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 NDUFA8P51970 172 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 UBE2HP62256 183 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 MRPS6P82932 125 aaKnown RBP7□□□□□ -1.29
PRKDC-211ENST00000546304 FAM160A1Q05DH4 1040 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 PDE4CQ08493 712 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms