RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 DUPD1Q68J44 220 aa14.09□□□□□ -0.15
PCMTD1-208ENST00000544451 P2RX7Q99572 595 aaKnown RBP14.09□□□□□ -0.15
PCMTD1-208ENST00000544451 PCDHA2Q9Y5H9 948 aa14.09□□□□□ -0.15
PCMTD1-208ENST00000544451 MAP3K6O95382 1288 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 KITP10721 976 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 CYP11B1P15538 503 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 PSMC4P43686 418 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 ALDH5A1P51649 535 aaPredicted RBP14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 RAD23BP54727 409 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 TUFT1Q9NNX1 390 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 SIX2Q9NPC8 291 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 GABBR1Q9UBS5 961 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 ZHX2Q9Y6X8 837 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 TBX3O15119 743 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 CNGA1P29973 690 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 RNASELQ05823 741 aaKnown RBP14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 COBLL1Q53SF7 1204 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 SWSAP1Q6NVH7 229 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 SP8Q8IXZ3 490 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 POLR3CQ9BUI4 534 aaPredicted RBP14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 GEMIN8Q9NWZ8 242 aaKnown RBP14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 ARL2BPQ9Y2Y0 163 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 ZNF142P52746 1687 aaPredicted RBP14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 NFIBO00712 420 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 RARGP13631 454 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 TFAMQ00059 246 aaKnown RBP14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 DGKZQ13574 1117 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 AUHQ13825 339 aaKnown RBP14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 PPP2R5DQ14738 602 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 GNPTABQ3T906 1256 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 C1orf186Q6ZWK4 172 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 CYTH2Q99418 400 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 MAK16Q9BXY0 300 aaKnown RBP14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 TMEM39BQ9GZU3 492 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 SEL1LQ9UBV2 794 aa14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 MAGED2Q9UNF1 606 aaPredicted RBP14.08□□□□□ -0.16
PCMTD1-208ENST00000544451 SNED1Q8TER0 1413 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 DDX3YO15523 660 aaKnown RBP14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 ATP13A4Q4VNC1 1196 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 CASC4Q6P4E1 433 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 EXOC3L1Q86VI1 746 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 AGAP11Q8TF27 550 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 IWS1Q96ST2 819 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 PCDHB18PQ96TA0 734 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 LRRC4BQ9NT99 713 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 EDIL3O43854 480 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 PPFIA2O75334 1257 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 APBA3O96018 575 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 TROVE2P10155 538 aaKnown RBP eCLIP14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 CDO1Q16878 200 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 ZNF572Q7Z3I7 529 aaPredicted RBP14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 LMNTD2Q8IXW0 634 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 HIPK4Q8NE63 616 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 PYROXD1Q8WU10 500 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 MAIP1Q8WWC4 291 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 MAML1Q92585 1016 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 KIF9Q9HAQ2 790 aa14.07□□□□□ -0.16
PCMTD1-208ENST00000544451 CCDC195A0A1B0GUA6 201 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 NQO1P15559 274 aaKnown RBP14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 CPA2P48052 419 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 DDR1Q08345 913 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 ZRSR2Q15696 482 aaKnown RBP14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 CDR2LQ86X02 465 aaPredicted RBP14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 TMEM143Q96AN5 459 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 RAB3IPQ96QF0 476 aaPredicted RBP14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 NUDCD1Q96RS6 583 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 TRABDQ9H4I3 376 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 OLFML3Q9NRN5 406 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 GJA3Q9Y6H8 435 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 PFASO15067 1338 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 A0A0A6YYK5 440 aaPredicted RBP14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 MARK3P27448 753 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 FNTAP49354 379 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 COPS2P61201 443 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 ARHGAP27Q6ZUM4 889 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 LONP2Q86WA8 852 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 SPOCK2Q92563 424 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 GLIS2Q9BZE0 524 aaPredicted RBP14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 OSBPL8Q9BZF1 889 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 SLCO1B3Q9NPD5 702 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 UBN1Q9NPG3 1134 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 NAALADL1Q9UQQ1 740 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 ATF5Q9Y2D1 282 aaPredicted RBP14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 MAD1L1Q9Y6D9 718 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 EIF3DO15371 548 aaKnown RBP eCLIP14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 ETS1P14921 441 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 GNA15P30679 374 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 GABPAQ06546 454 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 SPARCL1Q14515 664 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 DNAJC24Q6P3W2 148 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 CCDC62Q6P9F0 684 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 ATL2Q8NHH9 583 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 HSPH1Q92598 858 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 CFAP57Q96MR6 1250 aa14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 SAE1Q9UBE0 346 aaPredicted RBP14.06□□□□□ -0.16
PCMTD1-208ENST00000544451 BANF1O75531 89 aa14.05□□□□□ -0.16
PCMTD1-208ENST00000544451 SRGAP2CP0DJJ0 459 aa14.05□□□□□ -0.16
PCMTD1-208ENST00000544451 NPR1P16066 1061 aa14.05□□□□□ -0.16
PCMTD1-208ENST00000544451 ECHS1P30084 290 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms