RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 FSCN1Q16658 493 aaKnown RBP21.41■■□□□ 1.02
COPS7A-218ENST00000543939 SLC30A5Q8TAD4 765 aa21.41■■□□□ 1.02
COPS7A-218ENST00000543939 SHC3Q92529 594 aa21.41■■□□□ 1.02
COPS7A-218ENST00000543939 SECISBP2LQ93073 1101 aaKnown RBP21.41■■□□□ 1.02
COPS7A-218ENST00000543939 NAPGQ99747 312 aaPredicted RBP21.41■■□□□ 1.02
COPS7A-218ENST00000543939 CDT1Q9H211 546 aa21.41■■□□□ 1.02
COPS7A-218ENST00000543939 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.41■■□□□ 1.02
COPS7A-218ENST00000543939 MACROD2A1Z1Q3 448 aa21.41■■□□□ 1.02
COPS7A-218ENST00000543939 CSDE1O75534 798 aaKnown RBP21.41■■□□□ 1.02
COPS7A-218ENST00000543939 VNN1O95497 513 aa21.41■■□□□ 1.02
COPS7A-218ENST00000543939 CHMP4BP1P59074 171 aa21.41■■□□□ 1.02
COPS7A-218ENST00000543939 ADAM17P78536 824 aa21.41■■□□□ 1.02
COPS7A-218ENST00000543939 NAB2Q15742 525 aa21.41■■□□□ 1.02
COPS7A-218ENST00000543939 TMEM132AQ24JP5 1023 aa21.41■■□□□ 1.02
COPS7A-218ENST00000543939 SRGAP1Q7Z6B7 1085 aa21.41■■□□□ 1.02
COPS7A-218ENST00000543939 FAM71AQ8IYT1 594 aa21.41■■□□□ 1.02
COPS7A-218ENST00000543939 NLRP7Q8WX94 980 aa21.41■■□□□ 1.02
COPS7A-218ENST00000543939 TATDN2Q93075 761 aa21.41■■□□□ 1.02
COPS7A-218ENST00000543939 MRFAP1Q9Y605 127 aa21.41■■□□□ 1.02
COPS7A-218ENST00000543939 ATP8B3O60423 1300 aa21.4■■□□□ 1.02
COPS7A-218ENST00000543939 SMIM35A0A1B0GVV1 85 aa21.4■■□□□ 1.02
COPS7A-218ENST00000543939 SLU7O95391 586 aaKnown RBP21.4■■□□□ 1.02
COPS7A-218ENST00000543939 AP3M2P53677 418 aa21.4■■□□□ 1.02
COPS7A-218ENST00000543939 CAP1Q01518 475 aa21.4■■□□□ 1.02
COPS7A-218ENST00000543939 PRKCZQ05513 592 aa21.4■■□□□ 1.02
COPS7A-218ENST00000543939 HIC1Q14526 733 aa21.4■■□□□ 1.02
COPS7A-218ENST00000543939 SURF1Q15526 300 aa21.4■■□□□ 1.02
COPS7A-218ENST00000543939 ALKBH5Q6P6C2 394 aaKnown RBP21.4■■□□□ 1.02
COPS7A-218ENST00000543939 WDR49Q8IV35 697 aa21.4■■□□□ 1.02
COPS7A-218ENST00000543939 OR5B17Q8NGF7 314 aa21.4■■□□□ 1.02
COPS7A-218ENST00000543939 LNX1Q8TBB1 728 aaPredicted RBP21.4■■□□□ 1.02
COPS7A-218ENST00000543939 PI4K2AQ9BTU6 479 aa21.4■■□□□ 1.02
COPS7A-218ENST00000543939 ADAMTS10Q9H324 1103 aa21.4■■□□□ 1.02
COPS7A-218ENST00000543939 CREBZFQ9NS37 354 aa21.4■■□□□ 1.02
COPS7A-218ENST00000543939 PIK3CAP42336 1068 aa21.39■■□□□ 1.01
COPS7A-218ENST00000543939 PURAQ00577 322 aaKnown RBP21.39■■□□□ 1.01
COPS7A-218ENST00000543939 GCNT1Q02742 428 aa21.39■■□□□ 1.01
COPS7A-218ENST00000543939 BIRC3Q13489 604 aa21.39■■□□□ 1.01
COPS7A-218ENST00000543939 ENOSF1Q7L5Y1 443 aa21.39■■□□□ 1.01
COPS7A-218ENST00000543939 CDR2LQ86X02 465 aaPredicted RBP21.39■■□□□ 1.01
COPS7A-218ENST00000543939 THNSL1Q8IYQ7 743 aa21.39■■□□□ 1.01
COPS7A-218ENST00000543939 PPP1R13LQ8WUF5 828 aa21.39■■□□□ 1.01
COPS7A-218ENST00000543939 FAM81BQ96LP2 452 aa21.39■■□□□ 1.01
COPS7A-218ENST00000543939 KATNAL1Q9BW62 490 aa21.39■■□□□ 1.01
COPS7A-218ENST00000543939 PACSIN1Q9BY11 444 aa21.39■■□□□ 1.01
COPS7A-218ENST00000543939 PDZD7Q9H5P4 517 aa21.39■■□□□ 1.01
COPS7A-218ENST00000543939 SALL4Q9UJQ4 1053 aa21.39■■□□□ 1.01
COPS7A-218ENST00000543939 GPR25O00155 361 aa21.38■■□□□ 1.01
COPS7A-218ENST00000543939 MCF2P10911 925 aa21.38■■□□□ 1.01
COPS7A-218ENST00000543939 ARF4P18085 180 aaPredicted RBP21.38■■□□□ 1.01
COPS7A-218ENST00000543939 GJA9P57773 515 aa21.38■■□□□ 1.01
COPS7A-218ENST00000543939 CDC42EP1Q00587 391 aa21.38■■□□□ 1.01
COPS7A-218ENST00000543939 SP3Q02447 781 aa21.38■■□□□ 1.01
COPS7A-218ENST00000543939 RNF10Q8N5U6 811 aaKnown RBP21.38■■□□□ 1.01
COPS7A-218ENST00000543939 SCLT1Q96NL6 688 aa21.38■■□□□ 1.01
COPS7A-218ENST00000543939 DYNC1I1O14576 645 aa21.38■■□□□ 1.01
COPS7A-218ENST00000543939 TSPAN1O60635 241 aa21.38■■□□□ 1.01
COPS7A-218ENST00000543939 CYP2C9P11712 490 aa21.38■■□□□ 1.01
COPS7A-218ENST00000543939 WDR44Q5JSH3 913 aa21.38■■□□□ 1.01
COPS7A-218ENST00000543939 RUFY4Q6ZNE9 571 aa21.38■■□□□ 1.01
COPS7A-218ENST00000543939 CEP120Q8N960 986 aa21.38■■□□□ 1.01
COPS7A-218ENST00000543939 ELMO3Q96BJ8 720 aa21.38■■□□□ 1.01
COPS7A-218ENST00000543939 CFHR5Q9BXR6 569 aa21.38■■□□□ 1.01
COPS7A-218ENST00000543939 FAM49AQ9H0Q0 323 aaPredicted RBP21.38■■□□□ 1.01
COPS7A-218ENST00000543939 C1orf112Q9NSG2 853 aa21.38■■□□□ 1.01
COPS7A-218ENST00000543939 MYADML2A6NDP7 307 aa21.37■■□□□ 1.01
COPS7A-218ENST00000543939 BTNL10A8MVZ5 291 aa21.37■■□□□ 1.01
COPS7A-218ENST00000543939 KPNA6O60684 536 aa21.37■■□□□ 1.01
COPS7A-218ENST00000543939 GPR32O75388 356 aa21.37■■□□□ 1.01
COPS7A-218ENST00000543939 TACC1O75410 805 aa21.37■■□□□ 1.01
COPS7A-218ENST00000543939 MOCS3O95396 460 aa21.37■■□□□ 1.01
COPS7A-218ENST00000543939 TUBB2AQ13885 445 aa21.37■■□□□ 1.01
COPS7A-218ENST00000543939 KIZQ2M2Z5 673 aa21.37■■□□□ 1.01
COPS7A-218ENST00000543939 GLYCTKQ8IVS8 523 aa21.37■■□□□ 1.01
COPS7A-218ENST00000543939 TRIM58Q8NG06 486 aa21.37■■□□□ 1.01
COPS7A-218ENST00000543939 U2AF1L4Q8WU68 220 aaKnown RBP21.37■■□□□ 1.01
COPS7A-218ENST00000543939 CPB2Q96IY4 423 aa21.37■■□□□ 1.01
COPS7A-218ENST00000543939 AGPAT1Q99943 283 aa21.37■■□□□ 1.01
COPS7A-218ENST00000543939 TUBB2BQ9BVA1 445 aa21.37■■□□□ 1.01
COPS7A-218ENST00000543939 UPF3AQ9H1J1 476 aaKnown RBP21.37■■□□□ 1.01
COPS7A-218ENST00000543939 CAPN6Q9Y6Q1 641 aa21.37■■□□□ 1.01
COPS7A-218ENST00000543939 SCN10AQ9Y5Y9 1956 aa21.36■■□□□ 1.01
COPS7A-218ENST00000543939 B4GALT4O60513 344 aa21.36■■□□□ 1.01
COPS7A-218ENST00000543939 TNFAIP3P21580 790 aa21.36■■□□□ 1.01
COPS7A-218ENST00000543939 HOXC8P31273 242 aa21.36■■□□□ 1.01
COPS7A-218ENST00000543939 USP8P40818 1118 aa21.36■■□□□ 1.01
COPS7A-218ENST00000543939 NKX3-2P78367 333 aa21.36■■□□□ 1.01
COPS7A-218ENST00000543939 AMPD2Q01433 879 aa21.36■■□□□ 1.01
COPS7A-218ENST00000543939 POU5F1Q01860 360 aaKnown RBP21.36■■□□□ 1.01
COPS7A-218ENST00000543939 FAM212AQ96EL1 285 aa21.36■■□□□ 1.01
COPS7A-218ENST00000543939 ERO1AQ96HE7 468 aa21.36■■□□□ 1.01
COPS7A-218ENST00000543939 CDC23Q9UJX2 597 aa21.36■■□□□ 1.01
COPS7A-218ENST00000543939 INTUQ9ULD6 942 aa21.36■■□□□ 1.01
COPS7A-218ENST00000543939 CYP26A1O43174 497 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 SEPT4O43236 478 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 ERLIN2O94905 339 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 C6orf222P0C671 652 aaPredicted RBP21.35■■□□□ 1.01
COPS7A-218ENST00000543939 OSTNP61366 133 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 TRIM32Q13049 653 aa21.35■■□□□ 1.01
COPS7A-218ENST00000543939 NCOA4Q13772 614 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms