RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 NCKAP1LP55160 1127 aa20.41■□□□□ 0.86
TMED3-204ENST00000543455 ITIH3Q06033 890 aa20.41■□□□□ 0.86
TMED3-204ENST00000543455 DHX8Q14562 1220 aaKnown RBP20.41■□□□□ 0.86
TMED3-204ENST00000543455 TMEM31Q5JXX7 168 aa20.41■□□□□ 0.86
TMED3-204ENST00000543455 CD300LGQ6UXG3 332 aa20.41■□□□□ 0.86
TMED3-204ENST00000543455 PPFIBP1Q86W92 1011 aa20.41■□□□□ 0.86
TMED3-204ENST00000543455 KCNN1Q92952 543 aa20.41■□□□□ 0.86
TMED3-204ENST00000543455 FIZ1Q96SL8 496 aa20.41■□□□□ 0.86
TMED3-204ENST00000543455 HAPLN2Q9GZV7 340 aa20.41■□□□□ 0.86
TMED3-204ENST00000543455 SRPRBQ9Y5M8 271 aaKnown RBP20.41■□□□□ 0.86
TMED3-204ENST00000543455 ALADP13716 330 aa20.4■□□□□ 0.86
TMED3-204ENST00000543455 ZNF131P52739 623 aa20.4■□□□□ 0.86
TMED3-204ENST00000543455 OSTNP61366 133 aa20.4■□□□□ 0.86
TMED3-204ENST00000543455 CEBPZQ03701 1054 aaKnown RBP20.4■□□□□ 0.86
TMED3-204ENST00000543455 SOX4Q06945 474 aaPredicted RBP20.4■□□□□ 0.86
TMED3-204ENST00000543455 RTP2Q5QGT7 225 aa20.4■□□□□ 0.86
TMED3-204ENST00000543455 MPZL3Q6UWV2 235 aa20.4■□□□□ 0.86
TMED3-204ENST00000543455 TMEM87AQ8NBN3 555 aa20.4■□□□□ 0.86
TMED3-204ENST00000543455 ZMAT2Q96NC0 199 aaKnown RBP20.4■□□□□ 0.86
TMED3-204ENST00000543455 GOLGA2P5Q9HBQ8 144 aa20.4■□□□□ 0.86
TMED3-204ENST00000543455 ODF2LQ9ULJ1 636 aa20.4■□□□□ 0.86
TMED3-204ENST00000543455 MYO10Q9HD67 2058 aa20.4■□□□□ 0.86
TMED3-204ENST00000543455 SMIM28A0A1B0GU29 152 aa20.39■□□□□ 0.85
TMED3-204ENST00000543455 MCF2P10911 925 aa20.39■□□□□ 0.85
TMED3-204ENST00000543455 USP41Q3LFD5 358 aa20.39■□□□□ 0.85
TMED3-204ENST00000543455 KIAA1841Q6NSI8 718 aa20.39■□□□□ 0.85
TMED3-204ENST00000543455 DAXXQ9UER7 740 aaPredicted RBP20.39■□□□□ 0.85
TMED3-204ENST00000543455 MORC2Q9Y6X9 1032 aaPredicted RBP20.39■□□□□ 0.85
TMED3-204ENST00000543455 TADA2AO75478 443 aa20.38■□□□□ 0.85
TMED3-204ENST00000543455 RPL17P18621 184 aaKnown RBP20.38■□□□□ 0.85
TMED3-204ENST00000543455 SP100P23497 879 aaPredicted RBP20.38■□□□□ 0.85
TMED3-204ENST00000543455 SMTNP53814 917 aa20.38■□□□□ 0.85
TMED3-204ENST00000543455 SEZ6Q53EL9 994 aa20.38■□□□□ 0.85
TMED3-204ENST00000543455 PRSS55Q6UWB4 352 aaPredicted RBP20.38■□□□□ 0.85
TMED3-204ENST00000543455 TMC5Q6UXY8 1006 aa20.38■□□□□ 0.85
TMED3-204ENST00000543455 GPR65Q8IYL9 337 aa20.38■□□□□ 0.85
TMED3-204ENST00000543455 C3orf58Q8NDZ4 430 aa20.38■□□□□ 0.85
TMED3-204ENST00000543455 RIN2Q8WYP3 895 aaPredicted RBP20.38■□□□□ 0.85
TMED3-204ENST00000543455 LARP4BQ92615 738 aaKnown RBP20.38■□□□□ 0.85
TMED3-204ENST00000543455 SNX27Q96L92 541 aa20.38■□□□□ 0.85
TMED3-204ENST00000543455 SSX2IPQ9Y2D8 614 aa20.38■□□□□ 0.85
TMED3-204ENST00000543455 SF3B1O75533 1304 aaKnown RBP eCLIP20.38■□□□□ 0.853e-9■■■■■ 206.8
TMED3-204ENST00000543455 TOM1L1O75674 476 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 ADH1AP07327 375 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 SLC39A14Q15043 492 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 CES5AQ6NT32 575 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 ZPBP2Q6X784 338 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 HAUS6Q7Z4H7 955 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 APBB1IPQ7Z5R6 666 aaPredicted RBP20.37■□□□□ 0.85
TMED3-204ENST00000543455 CCDC94Q9BW85 323 aaPredicted RBP20.37■□□□□ 0.85
TMED3-204ENST00000543455 SFXN1Q9H9B4 322 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 MAN1C1Q9NR34 630 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 FNIP2Q9P278 1114 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 LARSQ9P2J5 1176 aaKnown RBP20.37■□□□□ 0.85
TMED3-204ENST00000543455 DOCK6Q96HP0 2047 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 A0A087X0B3 334 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 TMEM189-UBE2V1I3L0A0 370 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 HARSP12081 509 aaKnown RBP20.37■□□□□ 0.85
TMED3-204ENST00000543455 DDIT3P35638 169 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 MTHFRP42898 656 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 NASPP49321 788 aaPredicted RBP20.37■□□□□ 0.85
TMED3-204ENST00000543455 CLCNKBP51801 687 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 MCL1Q07820 350 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 STRN3Q13033 797 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 NOLC1Q14978 699 aaKnown RBP eCLIP20.37■□□□□ 0.85
TMED3-204ENST00000543455 LILRA6Q6PI73 481 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 GPR149Q86SP6 731 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 TMEM130Q8N3G9 435 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 NECTIN4Q96NY8 510 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 ZSCAN16Q9H4T2 348 aaPredicted RBP20.37■□□□□ 0.85
TMED3-204ENST00000543455 CNTN3Q9P232 1028 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 ANKFY1Q9P2R3 1169 aa20.37■□□□□ 0.85
TMED3-204ENST00000543455 C2CD4DB7Z1M9 353 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 SPATA31D3P0C874 917 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 MYBP10242 640 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 KCNE1P15382 129 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 UPP1Q16831 310 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 SLC10A6Q3KNW5 377 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 FAM171A1Q5VUB5 890 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 SPATA31D4Q6ZUB0 917 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 GLYCTKQ8IVS8 523 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 MYCT1Q8N699 235 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 RASSF8Q8NHQ8 419 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 LNX1Q8TBB1 728 aaPredicted RBP20.36■□□□□ 0.85
TMED3-204ENST00000543455 PIK3R5Q8WYR1 880 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 RIPOR3Q96MK2 946 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 ACAP3Q96P50 834 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 TCHPQ9BT92 498 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 PARVGQ9HBI0 331 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 KCNG1Q9UIX4 513 aa20.36■□□□□ 0.85
TMED3-204ENST00000543455 ADAM12O43184 909 aa20.35■□□□□ 0.85
TMED3-204ENST00000543455 TGM5O43548 720 aa20.35■□□□□ 0.85
TMED3-204ENST00000543455 FAM189A1O60320 539 aa20.35■□□□□ 0.85
TMED3-204ENST00000543455 FAM13AO94988 1023 aa20.35■□□□□ 0.85
TMED3-204ENST00000543455 PAPLNO95428 1278 aa20.35■□□□□ 0.85
TMED3-204ENST00000543455 GLUD1P00367 558 aa20.35■□□□□ 0.85
TMED3-204ENST00000543455 YARSP54577 528 aaKnown RBP20.35■□□□□ 0.85
TMED3-204ENST00000543455 SLC39A4Q6P5W5 647 aa20.35■□□□□ 0.85
TMED3-204ENST00000543455 PALB2Q86YC2 1186 aa20.35■□□□□ 0.85
TMED3-204ENST00000543455 CLSTN3Q9BQT9 956 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms