RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 MRPL43Q8N983 215 aaKnown RBP12.62□□□□□ -0.39
C2CD3-217ENST00000542452 KCNG4Q8TDN1 519 aa12.62□□□□□ -0.39
C2CD3-217ENST00000542452 HASPINQ8TF76 798 aa12.62□□□□□ -0.39
C2CD3-217ENST00000542452 LEO1Q8WVC0 666 aaPredicted RBP12.62□□□□□ -0.39
C2CD3-217ENST00000542452 DHX58Q96C10 678 aa12.62□□□□□ -0.39
C2CD3-217ENST00000542452 B3GALT6Q96L58 329 aa12.62□□□□□ -0.39
C2CD3-217ENST00000542452 UHRF1Q96T88 793 aaPredicted RBP12.62□□□□□ -0.39
C2CD3-217ENST00000542452 STRA6Q9BX79 667 aa12.62□□□□□ -0.39
C2CD3-217ENST00000542452 GPR62Q9BZJ7 368 aa12.62□□□□□ -0.39
C2CD3-217ENST00000542452 RCOR1Q9UKL0 485 aa12.62□□□□□ -0.39
C2CD3-217ENST00000542452 NCOR1O75376 2440 aa12.62□□□□□ -0.39
C2CD3-217ENST00000542452 TSC2P49815 1807 aa12.62□□□□□ -0.39
C2CD3-217ENST00000542452 MUC3AQ02505 3323 aa12.62□□□□□ -0.39
C2CD3-217ENST00000542452 ANKRD63C9JTQ0 380 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 MBTPS2O43462 519 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 ALDH2P05091 517 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 MYBP10242 640 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 CASP1P29466 404 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 CA8P35219 290 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 TNFSF9P41273 254 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 KCNA1Q09470 495 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 HSP90AA2PQ14568 343 aaPredicted RBP12.61□□□□□ -0.39
C2CD3-217ENST00000542452 ATL3Q6DD88 541 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 FUT10Q6P4F1 479 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 FAM178BQ8IXR5 827 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 C3orf58Q8NDZ4 430 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 GLIS3Q8NEA6 775 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 PPP2R3CQ969Q6 453 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 CDCA3Q99618 268 aaPredicted RBP12.61□□□□□ -0.39
C2CD3-217ENST00000542452 ST6GALNAC4Q9H4F1 302 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 KBTBD4Q9NVX7 518 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 TBC1D7Q9P0N9 293 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 CNTN3Q9P232 1028 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 CDH22Q9UJ99 828 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 HCFC2Q9Y5Z7 792 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 IRAK3Q9Y616 596 aa12.61□□□□□ -0.39
C2CD3-217ENST00000542452 SMIM28A0A1B0GU29 152 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 CARNS1A5YM72 827 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 H0YCG3 227 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 HNRNPDLO14979 420 aaKnown RBP12.6□□□□□ -0.39
C2CD3-217ENST00000542452 NCK2O43639 380 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 CXCL14O95715 111 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 THP07101 528 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 CXCL8P10145 99 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 EPCAMP16422 314 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 ME1P48163 572 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 LIG4P49917 911 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 COASYQ13057 564 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 SMAD4Q13485 552 aaKnown RBP12.6□□□□□ -0.39
C2CD3-217ENST00000542452 SLC10A6Q3KNW5 377 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 SYCE2Q6PIF2 218 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 ZNF720Q7Z2F6 126 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 SMRP1Q8NCR6 262 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 HPS3Q969F9 1004 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 BICD1Q96G01 975 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 KLHL5Q96PQ7 755 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 TCHPQ9BT92 498 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 CCDC94Q9BW85 323 aaPredicted RBP12.6□□□□□ -0.39
C2CD3-217ENST00000542452 TRIM9Q9C026 710 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 TNMDQ9H2S6 317 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 CD320Q9NPF0 282 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 CD207Q9UJ71 328 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 ADAM28Q9UKQ2 775 aa12.6□□□□□ -0.39
C2CD3-217ENST00000542452 MTCL1Q9Y4B5 1905 aaKnown RBP12.6□□□□□ -0.39
C2CD3-217ENST00000542452 C2CD2LO14523 706 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 CNPP09543 421 aaKnown RBP12.59□□□□□ -0.39
C2CD3-217ENST00000542452 IDEP14735 1019 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 GAP43P17677 238 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 GLUD2P49448 558 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 CLCNKBP51801 687 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 DSG1Q02413 1049 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 BECN1Q14457 450 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 RTP2Q5QGT7 225 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 KIAA0319Q5VV43 1072 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 ANKRD54Q6NXT1 300 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 TMEM184AQ6ZMB5 413 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 APBB1IPQ7Z5R6 666 aaPredicted RBP12.59□□□□□ -0.39
C2CD3-217ENST00000542452 GRAMD1CQ8IYS0 662 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 ZSWIM2Q8NEG5 633 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 SLC22A17Q8WUG5 538 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 C18orf25Q96B23 403 aaPredicted RBP12.59□□□□□ -0.39
C2CD3-217ENST00000542452 ACAP3Q96P50 834 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 COLEC11Q9BWP8 271 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 APOL5Q9BWW9 433 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 OLFML3Q9NRN5 406 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 CHST7Q9NS84 486 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 TUBGCP4Q9UGJ1 667 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 KCNG1Q9UIX4 513 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 CFAP45Q9UL16 551 aa12.59□□□□□ -0.39
C2CD3-217ENST00000542452 BDP1A6H8Y1 2624 aa12.58□□□□□ -0.39
C2CD3-217ENST00000542452 A0A0B4J269 797 aa12.58□□□□□ -0.4
C2CD3-217ENST00000542452 TMEM189-UBE2V1I3L0A0 370 aa12.58□□□□□ -0.4
C2CD3-217ENST00000542452 POLR2DO15514 142 aaKnown RBP12.58□□□□□ -0.4
C2CD3-217ENST00000542452 CLDN3O15551 220 aa12.58□□□□□ -0.4
C2CD3-217ENST00000542452 ACTN4O43707 911 aaKnown RBP12.58□□□□□ -0.4
C2CD3-217ENST00000542452 URODP06132 367 aa12.58□□□□□ -0.4
C2CD3-217ENST00000542452 KCNE1P15382 129 aa12.58□□□□□ -0.4
C2CD3-217ENST00000542452 PFKFB1P16118 471 aa12.58□□□□□ -0.4
C2CD3-217ENST00000542452 ADSSP30520 456 aa12.58□□□□□ -0.4
C2CD3-217ENST00000542452 YARSP54577 528 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms