RNA–Protein interactions for RNA: ENST00000542371.1

USP5-207, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 2

Gene USP5, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-207ENST00000542371 TSGA10Q9BZW7 698 aa17.21■□□□□ 0.35
USP5-207ENST00000542371 PDZD7Q9H5P4 517 aa17.21■□□□□ 0.35
USP5-207ENST00000542371 UBE2TQ9NPD8 197 aaPredicted RBP17.21■□□□□ 0.35
USP5-207ENST00000542371 TOPORSQ9NS56 1045 aaPredicted RBP17.21■□□□□ 0.35
USP5-207ENST00000542371 A0A1B0GUA9 196 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 TREHO43280 583 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 KIF5CO60282 957 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 B4GALT4O60513 344 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 ELNP15502 786 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 ARF4P18085 180 aaPredicted RBP17.2■□□□□ 0.34
USP5-207ENST00000542371 CCND3P30281 292 aaPredicted RBP17.2■□□□□ 0.34
USP5-207ENST00000542371 HIC1Q14526 733 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 SLC18A3Q16572 532 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 DCAF4L1Q3SXM0 396 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 WDR44Q5JSH3 913 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 RUFY4Q6ZNE9 571 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 KIAA1328Q86T90 577 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 VPS36Q86VN1 386 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 SLAIN1Q8ND83 568 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 JAKMIP2Q96AA8 810 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 ADPGKQ9BRR6 497 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 GPR88Q9GZN0 384 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 FAM49AQ9H0Q0 323 aaPredicted RBP17.2■□□□□ 0.34
USP5-207ENST00000542371 RPF1Q9H9Y2 349 aaKnown RBP17.2■□□□□ 0.34
USP5-207ENST00000542371 GTF2IRD1Q9UHL9 959 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 PCDHA13Q9Y5I0 950 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 SCN10AQ9Y5Y9 1956 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 ATP8B3O60423 1300 aa17.2■□□□□ 0.34
USP5-207ENST00000542371 PJA2O43164 708 aa17.19■□□□□ 0.34
USP5-207ENST00000542371 KRT86O43790 486 aa17.19■□□□□ 0.34
USP5-207ENST00000542371 CABYRO75952 493 aa17.19■□□□□ 0.34
USP5-207ENST00000542371 PGK1P00558 417 aa17.19■□□□□ 0.34
USP5-207ENST00000542371 HLA-DRAP01903 254 aa17.19■□□□□ 0.34
USP5-207ENST00000542371 DARSP14868 501 aaKnown RBP17.19■□□□□ 0.34
USP5-207ENST00000542371 TNFSF9P41273 254 aa17.19■□□□□ 0.34
USP5-207ENST00000542371 ARHGAP25P42331 645 aa17.19■□□□□ 0.34
USP5-207ENST00000542371 CRYBB1P53674 252 aaPredicted RBP17.19■□□□□ 0.34
USP5-207ENST00000542371 TERF1P54274 439 aa17.19■□□□□ 0.34
USP5-207ENST00000542371 GCNT1Q02742 428 aa17.19■□□□□ 0.34
USP5-207ENST00000542371 DUOXA2Q1HG44 320 aa17.19■□□□□ 0.34
USP5-207ENST00000542371 KIZQ2M2Z5 673 aa17.19■□□□□ 0.34
USP5-207ENST00000542371 TDRD10Q5VZ19 366 aaKnown RBP17.19■□□□□ 0.34
USP5-207ENST00000542371 CCSAPQ6IQ19 270 aaPredicted RBP17.19■□□□□ 0.34
USP5-207ENST00000542371 ARHGEF19Q8IW93 802 aa17.19■□□□□ 0.34
USP5-207ENST00000542371 HELQQ8TDG4 1101 aa17.19■□□□□ 0.34
USP5-207ENST00000542371 DNAJB3Q8WWF6 145 aa17.19■□□□□ 0.34
USP5-207ENST00000542371 DDX20Q9UHI6 824 aaKnown RBP17.19■□□□□ 0.34
USP5-207ENST00000542371 ZNF263O14978 683 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 EVI5O60447 810 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 EIF4BP23588 611 aaKnown RBP17.18■□□□□ 0.34
USP5-207ENST00000542371 MAGEA1P43355 309 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 WNT7BP56706 349 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 ARID5AQ03989 594 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 PTK2Q05397 1052 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 KIF5AQ12840 1032 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 BIRC3Q13489 604 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 BMS1Q14692 1282 aaKnown RBP17.18■□□□□ 0.34
USP5-207ENST00000542371 ARHGAP44Q17R89 818 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 NBPF20Q3BBV1 942 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 CXCL17Q6UXB2 119 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 SYT10Q6XYQ8 523 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 RNF180Q86T96 592 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 RPAINQ86UA6 219 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 RSPH3Q86UC2 560 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 CD302Q8IX05 232 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 THNSL1Q8IYQ7 743 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 PPP1R16BQ96T49 567 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 IFIH1Q9BYX4 1025 aaKnown RBP17.18■□□□□ 0.34
USP5-207ENST00000542371 ASB7Q9H672 318 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 LZTFL1Q9NQ48 299 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 C1orf112Q9NSG2 853 aa17.18■□□□□ 0.34
USP5-207ENST00000542371 FOXN3O00409 490 aaPredicted RBP17.17■□□□□ 0.34
USP5-207ENST00000542371 PHACTR2O75167 634 aa17.17■□□□□ 0.34
USP5-207ENST00000542371 STAG3L1P0CL83 205 aa17.17■□□□□ 0.34
USP5-207ENST00000542371 PIK3CAP42336 1068 aa17.17■□□□□ 0.34
USP5-207ENST00000542371 GNG11P61952 73 aa17.17■□□□□ 0.34
USP5-207ENST00000542371 PTPN11Q06124 597 aaPredicted RBP17.17■□□□□ 0.34
USP5-207ENST00000542371 ENOX2Q16206 610 aaKnown RBP17.17■□□□□ 0.34
USP5-207ENST00000542371 SEZ6Q53EL9 994 aa17.17■□□□□ 0.34
USP5-207ENST00000542371 CATSPER4Q7RTX7 472 aa17.17■□□□□ 0.34
USP5-207ENST00000542371 ZNF571Q7Z3V5 609 aaPredicted RBP17.17■□□□□ 0.34
USP5-207ENST00000542371 NT5DC4Q86YG4 428 aa17.17■□□□□ 0.34
USP5-207ENST00000542371 FAM71AQ8IYT1 594 aa17.17■□□□□ 0.34
USP5-207ENST00000542371 PPM1KQ8N3J5 372 aa17.17■□□□□ 0.34
USP5-207ENST00000542371 SHC3Q92529 594 aa17.17■□□□□ 0.34
USP5-207ENST00000542371 DHX38Q92620 1227 aaKnown RBP17.17■□□□□ 0.34
USP5-207ENST00000542371 ANKRD36BP1Q96IX9 119 aa17.17■□□□□ 0.34
USP5-207ENST00000542371 PTPRJQ12913 1337 aa17.17■□□□□ 0.34
USP5-207ENST00000542371 VNN1O95497 513 aa17.16■□□□□ 0.34
USP5-207ENST00000542371 TNNC2P02585 160 aa17.16■□□□□ 0.34
USP5-207ENST00000542371 ASGR1P07306 291 aa17.16■□□□□ 0.34
USP5-207ENST00000542371 GRM5P41594 1212 aa17.16■□□□□ 0.34
USP5-207ENST00000542371 ZNF200P98182 395 aaPredicted RBP17.16■□□□□ 0.34
USP5-207ENST00000542371 CYP27A1Q02318 531 aa17.16■□□□□ 0.34
USP5-207ENST00000542371 GFPT1Q06210 699 aaPredicted RBP17.16■□□□□ 0.34
USP5-207ENST00000542371 KCNA10Q16322 511 aa17.16■□□□□ 0.34
USP5-207ENST00000542371 CCDC122Q5T0U0 273 aa17.16■□□□□ 0.34
USP5-207ENST00000542371 NOTUMQ6P988 496 aa17.16■□□□□ 0.34
USP5-207ENST00000542371 SLC27A1Q6PCB7 646 aa17.16■□□□□ 0.34
USP5-207ENST00000542371 TRAPPC11Q7Z392 1133 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms