RNA–Protein interactions for RNA: ENST00000541806.5

CLDN2-203, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 3,150 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-203ENST00000541806 KLHL23Q8NBE8 558 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 CCDC26Q8TAB7 109 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 UHMK1Q8TAS1 419 aaKnown RBP9.26□□□□□ -0.93
CLDN2-203ENST00000541806 HELQQ8TDG4 1101 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 ZBTB10Q96DT7 871 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 TACO1Q9BSH4 297 aaKnown RBP9.26□□□□□ -0.93
CLDN2-203ENST00000541806 TIPINQ9BVW5 301 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 TRIM7Q9C029 511 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 GINM1Q9NU53 330 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 TMEM59LQ9UK28 342 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 PTPN22Q9Y2R2 807 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 NCANO14594 1321 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 PSME4Q14997 1843 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 SPATA31C2B4DYI2 1134 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 RTN2O75298 545 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 SRGAP2CP0DJJ0 459 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 XKR3Q5GH77 459 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 SCARA3Q6AZY7 606 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 FAM71AQ8IYT1 594 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 MSL3Q8N5Y2 521 aaKnown RBP9.26□□□□□ -0.93
CLDN2-203ENST00000541806 ZNF564Q8TBZ8 553 aaPredicted RBP9.26□□□□□ -0.93
CLDN2-203ENST00000541806 SLC7A3Q8WY07 619 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 ZNF516Q92618 1163 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 CAVIN3Q969G5 261 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 C18orf8Q96DM3 657 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 CDHR1Q96JP9 859 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 CLMNQ96JQ2 1002 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 PPP1R16BQ96T49 567 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 C1orf112Q9NSG2 853 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 FBXO40Q9UH90 709 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 AGO2Q9UKV8 859 aaKnown RBP9.26□□□□□ -0.93
CLDN2-203ENST00000541806 PNMA2Q9UL42 364 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 SNX24Q9Y343 169 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 UTP11Q9Y3A2 253 aaKnown RBP9.26□□□□□ -0.93
CLDN2-203ENST00000541806 CSADQ9Y600 493 aa9.26□□□□□ -0.93
CLDN2-203ENST00000541806 SMIM23A6NLE4 172 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 P4HA2O15460 535 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 DKC1O60832 514 aaKnown RBP eCLIP9.25□□□□□ -0.93
CLDN2-203ENST00000541806 IVLP07476 585 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 SCP2P22307 547 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 OSTNP61366 133 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 GNGT1P63211 74 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 WDR44Q5JSH3 913 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 XRRA1Q6P2D8 792 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 RHOT2Q8IXI1 618 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 LRRC71Q8N4P6 559 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 ST6GALNAC4Q9H4F1 302 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 CNOT8Q9UFF9 292 aaKnown RBP9.25□□□□□ -0.93
CLDN2-203ENST00000541806 NOCTQ9UK39 431 aaKnown RBP9.25□□□□□ -0.93
CLDN2-203ENST00000541806 TRPC6Q9Y210 931 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 GOLGA6L10A0A0M3HER8 536 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 TCRBV7S2A1N4TA0A589 114 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 ANKRD33BA6NCL7 494 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 OATP04181 439 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 UBA1P22314 1058 aaKnown RBP9.25□□□□□ -0.93
CLDN2-203ENST00000541806 RFX1P22670 979 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 GLRA2P23416 452 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 CTNNA1P35221 906 aaKnown RBP9.25□□□□□ -0.93
CLDN2-203ENST00000541806 KCNJ1P48048 391 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 DR1Q01658 176 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 PPFIA1Q13136 1202 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 PDCLQ13371 301 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 SNX1Q13596 522 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 ZNF394Q53GI3 561 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 ALS2CLQ60I27 953 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 LRRC31Q6UY01 552 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 UBL4BQ8N7F7 174 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 SHC3Q92529 594 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 MAGOHBQ96A72 148 aaKnown RBP9.25□□□□□ -0.93
CLDN2-203ENST00000541806 MSTO1Q9BUK6 570 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 ISCUQ9H1K1 167 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 SLC24A3Q9HC58 644 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 ATP8A1Q9Y2Q0 1164 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 SNCAIPQ9Y6H5 919 aa9.25□□□□□ -0.93
CLDN2-203ENST00000541806 TTLL13PA6NNM8 815 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 GOLGA8KD6RF30 607 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 CCDC188H7C350 402 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 GGPS1O95749 300 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 HLA-DRAP01903 254 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 ZBTB48P10074 688 aaPredicted RBP9.24□□□□□ -0.93
CLDN2-203ENST00000541806 OAZ1P54368 228 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 PLTPP55058 493 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 DHX9Q08211 1270 aaKnown RBP9.24□□□□□ -0.93
CLDN2-203ENST00000541806 ZFYVE27Q5T4F4 411 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 USP37Q86T82 979 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 SULF1Q8IWU6 871 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 SAMD3Q8N6K7 520 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 SLC17A8Q8NDX2 589 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 RDM1Q8NG50 284 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.24□□□□□ -0.93
CLDN2-203ENST00000541806 SPIRE2Q8WWL2 714 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 FAM107BQ9H098 131 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 PSD3Q9NYI0 1048 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 RBAKQ9NYW8 714 aaPredicted RBP9.24□□□□□ -0.93
CLDN2-203ENST00000541806 ATAD5Q96QE3 1844 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 PTPRJQ12913 1337 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 RBBP6Q7Z6E9 1792 aaKnown RBP9.24□□□□□ -0.93
CLDN2-203ENST00000541806 GJB6O95452 261 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 GJB1P08034 283 aa9.24□□□□□ -0.93
CLDN2-203ENST00000541806 CFHP08603 1231 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms