RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 TTI1O43156 1089 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 NCK2O43639 380 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 DSG3P32926 999 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 FMR1Q06787 632 aaKnown RBP eCLIP14.95□□□□□ -0.02
USP3-204ENST00000540797 DCAF4L1Q3SXM0 396 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 GPATCH11Q8N954 259 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 KIFC3Q9BVG8 833 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 PXMP2Q9NR77 195 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 MAP2P11137 1827 aaKnown RBP14.95□□□□□ -0.02
USP3-204ENST00000540797 STAG3L1P0CL83 205 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 MGAT5BQ3V5L5 792 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 TMEM8AQ9HCN3 771 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 DYRK4Q9NR20 520 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 ZC3H4Q9UPT8 1303 aaKnown RBP14.95□□□□□ -0.02
USP3-204ENST00000540797 GPR182O15218 404 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 SKIP12755 728 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 TPI1P60174 286 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 USP50Q70EL3 339 aaPredicted RBP14.95□□□□□ -0.02
USP3-204ENST00000540797 CDR2LQ86X02 465 aaPredicted RBP14.95□□□□□ -0.02
USP3-204ENST00000540797 CPA5Q8WXQ8 436 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 KCNQ5Q9NR82 932 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 TUBE1Q9UJT0 475 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 TBX20Q9UMR3 447 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 SERPINB6P35237 376 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 IRX4P78413 519 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 DBN1Q16643 649 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 PRG3Q9Y2Y8 225 aaPredicted RBP14.95□□□□□ -0.02
USP3-204ENST00000540797 ADGRG1Q9Y653 693 aa14.95□□□□□ -0.02
USP3-204ENST00000540797 PDGFRAP16234 1089 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 NOP14P78316 857 aaKnown RBP14.94□□□□□ -0.02
USP3-204ENST00000540797 SLC30A5Q8TAD4 765 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 FAM49BQ9NUQ9 324 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 FAM8A1Q9UBU6 413 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 CCDC151A5D8V7 595 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 APOL1O14791 398 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 CHEK2O96017 543 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 HMBSP08397 361 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 UCHL3P15374 230 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 TAC1P20366 129 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 FKBP1AP62942 108 aaKnown RBP14.94□□□□□ -0.02
USP3-204ENST00000540797 KRT17Q04695 432 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 PCNX4Q63HM2 1172 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 TRIM67Q6ZTA4 783 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 SH3TC2Q8TF17 1288 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 SCG3Q8WXD2 468 aaKnown RBP14.94□□□□□ -0.02
USP3-204ENST00000540797 TRPV6Q9H1D0 765 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 NOVA2Q9UNW9 492 aaKnown RBP14.94□□□□□ -0.02
USP3-204ENST00000540797 TCRBV5S4A2TA0A5A2 114 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 CLCN3P51790 818 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 RCN2Q14257 317 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 SEC23AQ15436 765 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 NFRKBQ6P4R8 1299 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 FRA10AC1Q70Z53 315 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 CEP120Q8N960 986 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 ATP8B1O43520 1251 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 CAV1Q03135 178 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 DRP2Q13474 957 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 C6orf118Q5T5N4 469 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 CLEC17AQ6ZS10 378 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 LMNTD2Q8IXW0 634 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 SYTL5Q8TDW5 730 aaPredicted RBP14.94□□□□□ -0.02
USP3-204ENST00000540797 MKNK1Q9BUB5 465 aa14.94□□□□□ -0.02
USP3-204ENST00000540797 WDR91A4D1P6 747 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 PPP1R12AO14974 1030 aaPredicted RBP14.93□□□□□ -0.02
USP3-204ENST00000540797 ALDH7A1P49419 539 aaKnown RBP14.93□□□□□ -0.02
USP3-204ENST00000540797 OSBPL9Q96SU4 736 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 RUSC1Q9BVN2 902 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 AAASQ9NRG9 546 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 NVLO15381 856 aaKnown RBP14.93□□□□□ -0.02
USP3-204ENST00000540797 ADCY2Q08462 1091 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 NSUN2Q08J23 767 aaKnown RBP eCLIP14.93□□□□□ -0.02
USP3-204ENST00000540797 CFAP61Q8NHU2 1237 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 CDC26Q8NHZ8 85 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 HPDLQ96IR7 371 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.93□□□□□ -0.023e-7■□□□□ 11.3
USP3-204ENST00000540797 IDI2Q9BXS1 227 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 BFARQ9NZS9 450 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 BAIAP2L1Q9UHR4 511 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 PACSIN2Q9UNF0 486 aaPredicted RBP14.93□□□□□ -0.02
USP3-204ENST00000540797 WEE2P0C1S8 567 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 PNPLA4P41247 253 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 SLC1A1P43005 524 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 TAF6P49848 677 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 GPS1Q13098 491 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 ALS2CLQ60I27 953 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 APOBEC3HQ6NTF7 200 aaKnown RBP14.93□□□□□ -0.02
USP3-204ENST00000540797 TRIM59Q8IWR1 403 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 STKLD1Q8NE28 680 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 SLC4A9Q96Q91 983 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 NIF3L1Q9GZT8 377 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 KLK14Q9P0G3 267 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 KRT38O76015 456 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 CHRNA3P32297 505 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 NNTQ13423 1086 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 BFSP2Q13515 415 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 CCDC144BQ3MJ40 725 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 EMBQ6PCB8 327 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 PID1Q7Z2X4 250 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 DNERQ8NFT8 737 aa14.93□□□□□ -0.02
USP3-204ENST00000540797 PDCD2LQ9BRP1 358 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms