RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 FAM136AQ96C01 138 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 ZNF333Q96JL9 665 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 ZSWIM1Q9BR11 485 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 TBC1D10AQ9BXI6 508 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 FGFBP2Q9BYJ0 223 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 WNT8AQ9H1J5 351 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 TMEM260Q9NX78 707 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 PDP2Q9P2J9 529 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 PCDHA12Q9UN75 941 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 ZBTB1Q9Y2K1 713 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 ALG6Q9Y672 507 aa9.63□□□□□ -0.87
SNHG1-209ENST00000538654 MAP3K7O43318 606 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 CDH16O75309 829 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 ACSL3O95573 720 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 TTC4O95801 387 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 CYP11B2P19099 503 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 RASA1P20936 1047 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 MARK3P27448 753 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 OCRLQ01968 901 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 CCDC6Q16204 474 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 LRRC23Q53EV4 343 aaPredicted RBP9.62□□□□□ -0.87
SNHG1-209ENST00000538654 OR52E8Q6IFG1 317 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 TTC27Q6P3X3 843 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 CCDC174Q6PII3 467 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 MAEAQ7L5Y9 396 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 CHPFQ8IZ52 775 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 RIBC1Q8N443 379 aaPredicted RBP9.62□□□□□ -0.87
SNHG1-209ENST00000538654 SLC17A8Q8NDX2 589 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 B4GALNT2Q8NHY0 566 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 CCDC28BQ9BUN5 200 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 TLE6Q9H808 572 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 LARSQ9P2J5 1176 aaKnown RBP9.62□□□□□ -0.87
SNHG1-209ENST00000538654 DDX25Q9UHL0 483 aaKnown RBP9.62□□□□□ -0.87
SNHG1-209ENST00000538654 TAGLN3Q9UI15 199 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 PHLPP1O60346 1717 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 DCCP43146 1447 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 MAGEA13PA6NCF6 341 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 MAN1A1P33908 653 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 TUBP50607 506 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 ECM1Q16610 540 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 KCTD19Q17RG1 926 aaPredicted RBP9.62□□□□□ -0.87
SNHG1-209ENST00000538654 RGS9BPQ6ZS82 235 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 CEP128Q6ZU80 1094 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 MIGA2Q7L4E1 593 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 ANKLE1Q8NAG6 615 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 FAM81AQ8TBF8 368 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 HELQQ8TDG4 1101 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 SLC35C1Q96A29 364 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 IFT43Q96FT9 208 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 FAM84BQ96KN1 310 aaPredicted RBP9.62□□□□□ -0.87
SNHG1-209ENST00000538654 PAIP2Q9BPZ3 127 aaKnown RBP9.62□□□□□ -0.87
SNHG1-209ENST00000538654 TUBB6Q9BUF5 446 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 PLVAPQ9BX97 442 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 DMAP1Q9NPF5 467 aaPredicted RBP9.62□□□□□ -0.87
SNHG1-209ENST00000538654 UBN1Q9NPG3 1134 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 CASS4Q9NQ75 786 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 SAR1AQ9NR31 198 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 TMOD4Q9NZQ9 345 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 LNPEPQ9UIQ6 1025 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 HAO1Q9UJM8 370 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 KIAA1024Q9UPX6 916 aa9.62□□□□□ -0.87
SNHG1-209ENST00000538654 MRPS23Q9Y3D9 190 aaKnown RBP9.62□□□□□ -0.87
SNHG1-209ENST00000538654 RTCBQ9Y3I0 505 aaKnown RBP9.62□□□□□ -0.87
SNHG1-209ENST00000538654 SLIT2O94813 1529 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 FAM47DPA6NHR8 397 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 EIF4E1BA6NMX2 242 aaKnown RBP9.61□□□□□ -0.87
SNHG1-209ENST00000538654 TBX3O15119 743 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 NR3C1P04150 777 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 TARSP26639 723 aaKnown RBP9.61□□□□□ -0.87
SNHG1-209ENST00000538654 PTPN4P29074 926 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 POLE2P56282 527 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 RNASELQ05823 741 aaKnown RBP9.61□□□□□ -0.87
SNHG1-209ENST00000538654 EPM2AIP1Q7L775 607 aaPredicted RBP9.61□□□□□ -0.87
SNHG1-209ENST00000538654 RELL1Q8IUW5 271 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 PPFIBP2Q8ND30 876 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 PIGSQ96S52 555 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 NELL2Q99435 816 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 SYT11Q9BT88 431 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 TIPINQ9BVW5 301 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 KIAA1683Q9H0B3 1180 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 VCX3BQ9H321 246 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 VCX3AQ9NNX9 186 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 MLXIPLQ9NP71 852 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 IGSF9BQ9UPX0 1349 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 ITGB4P16144 1822 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 PIK3CDO00329 1044 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 AKAP3O75969 853 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 GH1P01241 217 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 CREB1P16220 341 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 ATF3P18847 181 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 SLC18A1P54219 525 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 STAT4Q14765 748 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 KPNB1Q14974 876 aaKnown RBP9.61□□□□□ -0.87
SNHG1-209ENST00000538654 GSTA3Q16772 222 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 TBC1D25Q3MII6 688 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 UBAP2Q5T6F2 1119 aaKnown RBP9.61□□□□□ -0.87
SNHG1-209ENST00000538654 MCF2L2Q86YR7 1114 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 SLC13A5Q86YT5 568 aaPredicted RBP9.61□□□□□ -0.87
SNHG1-209ENST00000538654 KIAA1958Q8N8K9 716 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 MAIP1Q8WWC4 291 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms