RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 GYG1P46976 350 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 CLK1P49759 484 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 TCP10Q12799 353 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 PIGHQ14442 188 aaPredicted RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 GRM4Q14833 912 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 LVRNQ6Q4G3 990 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 ZNF677Q86XU0 584 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 TC2NQ8N9U0 490 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 CCSER1Q9C0I3 900 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 PUS7LQ9H0K6 701 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 C2orf40Q9H1Z8 148 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 MLXIPLQ9NP71 852 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 LZTS3O60299 673 aaPredicted RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 SDC4P31431 198 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 ST13P50502 369 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 GEMIN4P57678 1058 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 DPYDQ12882 1025 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 STX5Q13190 355 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 TP53BP2Q13625 1128 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 R3HDM1Q15032 1099 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 STILQ15468 1287 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 ANGPTL8Q6UXH0 198 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 TRAPPC11Q7Z392 1133 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 KRT27Q7Z3Y8 459 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 SGMS1Q86VZ5 419 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 RHPN2Q8IUC4 686 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 RBBP8Q99708 897 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 HEMGNQ9BXL5 484 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 TBC1D22BQ9NU19 505 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 RHBDL2Q9NX52 303 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 KCND2Q9NZV8 630 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 HERC5Q9UII4 1024 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 FBXO2Q9UK22 296 aaPredicted RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 DYTNA2CJ06 578 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 WBP4O75554 376 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 NPEPPSP55786 919 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 CSTF3Q12996 717 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 RCN1Q15293 331 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 TRMT5Q32P41 509 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 ARMCX4Q5H9R4 360 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 SFR1Q86XK3 245 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 JAMLQ86YT9 394 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 SH2D3CQ8N5H7 860 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 ZBTB10Q96DT7 871 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 RBM15Q96T37 977 aaKnown RBP eCLIP7.28□□□□□ -1.243e-6■□□□□ 9.5
SORT1-209ENST00000538502 OLFM1Q99784 485 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 RAD21L1Q9H4I0 556 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 RUBCNLQ9H714 662 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 TUBGCP4Q9UGJ1 667 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 NEU2Q9Y3R4 380 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 CROCC2H7BZ55 1655 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 GOLGA8RI6L899 631 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 CES2O00748 559 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 P4HA2O15460 535 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 RHOBTB3O94955 611 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 THRAP10827 490 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 BLVRAP53004 296 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 CACNB1Q02641 598 aaPredicted RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 SFSWAPQ12872 951 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 ZNF211Q13398 564 aaPredicted RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 CENPPQ6IPU0 288 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 BBS7Q8IWZ6 715 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 NIM1KQ8IY84 436 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 ARHGEF1Q92888 912 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 EEF2KMTQ96G04 330 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 LY9Q9HBG7 655 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 ATAD3AQ9NVI7 634 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 WHRNQ9P202 907 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 FAM153AQ9UHL3 310 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 MAD2L2Q9UI95 211 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 ERVV-1B6SEH8 477 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 PI4K2BG5E9Z4 385 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 K7ERI5 159 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 RAD51CO43502 376 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 SEC24DO94855 1032 aaPredicted RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 FSBPO95073 299 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 PSMA4P25789 261 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 BCAR1P56945 870 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 LAMC2Q13753 1193 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 YTHDF3Q7Z739 585 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 DNAJC10Q8IXB1 793 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 PPP2R3CQ969Q6 453 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 TMEM245Q9H330 911 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 TUFT1Q9NNX1 390 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 PAK5Q9P286 719 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 ATXN2Q99700 1313 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 BICRAQ9NZM4 1560 aa7.27□□□□□ -1.24
SORT1-209ENST00000538502 TMEM191CA6NGB0 347 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 LIN7AO14910 233 aaPredicted RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 CNTFP26441 200 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 PTPN4P29074 926 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 GPC3P51654 580 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 EIF3EP60228 445 aaKnown RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 GTF2IP78347 998 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 ZNF699Q32M78 642 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 IRGCQ6NXR0 463 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 DDIASQ8IXT1 998 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 ADSSL1Q8N142 457 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 SLC35G2Q8TBE7 412 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms