RNA–Protein interactions for RNA: ENST00000538361.1

C2CD3-211, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 863 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-211ENST00000538361 NR2E1Q9Y466 385 aa14.57□□□□□ -0.08
C2CD3-211ENST00000538361 GTF3C3Q9Y5Q9 886 aa14.57□□□□□ -0.08
C2CD3-211ENST00000538361 CITO14578 2027 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 NPHP3-ACAD11A0A0J9YXS1 232 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 F8W810 466 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 TEX28O15482 410 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 TBCAO75347 108 aaKnown RBP14.56□□□□□ -0.08
C2CD3-211ENST00000538361 FAM13AO94988 1023 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 BRD1O95696 1058 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 GLUD1P00367 558 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 C1RP00736 705 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 PROZP22891 400 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 ABCD1P33897 745 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 MCM6Q14566 821 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 ZPBP2Q6X784 338 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 HAUS6Q7Z4H7 955 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 MYCT1Q8N699 235 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 C12orf76Q8N812 135 aaPredicted RBP14.56□□□□□ -0.08
C2CD3-211ENST00000538361 LARP4BQ92615 738 aaKnown RBP14.56□□□□□ -0.08
C2CD3-211ENST00000538361 RABGGTAQ92696 567 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 UROC1Q96N76 676 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 PPP1R10Q96QC0 940 aaKnown RBP14.56□□□□□ -0.08
C2CD3-211ENST00000538361 PAAF1Q9BRP4 392 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 LRFN3Q9BTN0 628 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 FNIP2Q9P278 1114 aa14.56□□□□□ -0.08
C2CD3-211ENST00000538361 FBXO2Q9UK22 296 aaPredicted RBP14.56□□□□□ -0.08
C2CD3-211ENST00000538361 CLDN3O15551 220 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 TRAPPC3O43617 180 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 KIF4AO95239 1232 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 COL9A1P20849 921 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 MATR3P43243 847 aaKnown RBP eCLIP14.55□□□□□ -0.08
C2CD3-211ENST00000538361 ZNF131P52739 623 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 NCKAP1LP55160 1127 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 OSTNP61366 133 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 NAB2Q15742 525 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 FAM173BQ6P4H8 233 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 PDXDC1Q6P996 788 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 DCLRE1AQ6PJP8 1040 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 ALKAL1Q6UXT8 129 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 TMC5Q6UXY8 1006 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 KRI1Q8N9T8 703 aaKnown RBP14.55□□□□□ -0.08
C2CD3-211ENST00000538361 HDAC7Q8WUI4 952 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 RIN2Q8WYP3 895 aaPredicted RBP14.55□□□□□ -0.08
C2CD3-211ENST00000538361 KCNN1Q92952 543 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 BICD1Q96G01 975 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 DDX27Q96GQ7 796 aaKnown RBP14.55□□□□□ -0.08
C2CD3-211ENST00000538361 EPSTI1Q96J88 318 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 B3GALT6Q96L58 329 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 TTPALQ9BTX7 342 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 CXCL16Q9H2A7 254 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 ZHX3Q9H4I2 956 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 BLOC1S4Q9NUP1 217 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 ANKFY1Q9P2R3 1169 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 CACNG4Q9UBN1 327 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 STK17AQ9UEE5 414 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 MUTYHQ9UIF7 546 aa14.55□□□□□ -0.08
C2CD3-211ENST00000538361 MORC2Q9Y6X9 1032 aaPredicted RBP14.55□□□□□ -0.08
C2CD3-211ENST00000538361 SMIM28A0A1B0GU29 152 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 FAM86C2PA6NEL3 165 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 PRR33A8MZF0 331 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 TMEM189-UBE2V1I3L0A0 370 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 TRAK2O60296 914 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 B3GAT3O94766 335 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 HARSP12081 509 aaKnown RBP14.54□□□□□ -0.08
C2CD3-211ENST00000538361 NOLC1Q14978 699 aaKnown RBP eCLIP14.54□□□□□ -0.08
C2CD3-211ENST00000538361 SLC39A14Q15043 492 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 KYAT1Q16773 422 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 XKR4Q5GH76 650 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 GLRA4Q5JXX5 417 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 SPECC1Q5M775 1068 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 FAM171A1Q5VUB5 890 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 RRAGBQ5VZM2 374 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 CYP26C1Q6V0L0 522 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 C15orf39Q6ZRI6 1047 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 GPR149Q86SP6 731 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 CEP120Q8N960 986 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 HASPINQ8TF76 798 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 ZNF396Q96N95 335 aaPredicted RBP14.54□□□□□ -0.08
C2CD3-211ENST00000538361 CLIC6Q96NY7 704 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 PLEKHA4Q9H4M7 779 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 POMKQ9H5K3 350 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 MAN1C1Q9NR34 630 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 TSHZ2Q9NRE2 1034 aa14.54□□□□□ -0.08
C2CD3-211ENST00000538361 MTCL1Q9Y4B5 1905 aaKnown RBP14.54□□□□□ -0.08
C2CD3-211ENST00000538361 TRIOO75962 3097 aa14.53□□□□□ -0.08
C2CD3-211ENST00000538361 PLXNA3P51805 1871 aa14.53□□□□□ -0.08
C2CD3-211ENST00000538361 K7ENM7 598 aa14.53□□□□□ -0.08
C2CD3-211ENST00000538361 ABLIM1O14639 778 aa14.53□□□□□ -0.08
C2CD3-211ENST00000538361 HNRNPDLO14979 420 aaKnown RBP14.53□□□□□ -0.08
C2CD3-211ENST00000538361 KCNE1P15382 129 aa14.53□□□□□ -0.08
C2CD3-211ENST00000538361 LIG4P49917 911 aa14.53□□□□□ -0.08
C2CD3-211ENST00000538361 CLCNKBP51801 687 aa14.53□□□□□ -0.08
C2CD3-211ENST00000538361 MCL1Q07820 350 aa14.53□□□□□ -0.08
C2CD3-211ENST00000538361 UPP1Q16831 310 aa14.53□□□□□ -0.08
C2CD3-211ENST00000538361 KANK3Q6NY19 840 aa14.53□□□□□ -0.08
C2CD3-211ENST00000538361 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.53□□□□□ -0.08
C2CD3-211ENST00000538361 CCDC73Q6ZRK6 1079 aa14.53□□□□□ -0.08
C2CD3-211ENST00000538361 USP49Q70CQ1 688 aa14.53□□□□□ -0.08
C2CD3-211ENST00000538361 SV2BQ7L1I2 683 aa14.53□□□□□ -0.08
C2CD3-211ENST00000538361 CEP57Q86XR8 500 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms