RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 ATF7P17544 494 aaPredicted RBP9.33□□□□□ -0.92
UBE3B-208ENST00000538070 USP37Q86T82 979 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 CCDC125Q86Z20 511 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 SPIRE2Q8WWL2 714 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 INO80BQ9C086 356 aaPredicted RBP9.33□□□□□ -0.92
UBE3B-208ENST00000538070 TMEM8AQ9HCN3 771 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 ZNF214Q9UL59 606 aaPredicted RBP9.33□□□□□ -0.92
UBE3B-208ENST00000538070 UMODL1Q5DID0 1318 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 TTLL13PA6NNM8 815 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 CCDC188H7C350 402 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 O00370 1275 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 PPFIA4O75335 1185 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 DGAT1O75907 488 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 SHBGP04278 402 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 WEE2P0C1S8 567 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 KCNA2P16389 499 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 KIF22Q14807 665 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 SGO2Q562F6 1265 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 GJC2Q5T442 439 aaPredicted RBP9.33□□□□□ -0.92
UBE3B-208ENST00000538070 CAVIN3Q969G5 261 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 ATP6V1G3Q96LB4 118 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 RAB17Q9H0T7 212 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 ANKEF1Q9NU02 776 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 RNF19AQ9NV58 838 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 PSD3Q9NYI0 1048 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 RASAL2Q9UJF2 1139 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 MTUS1Q9ULD2 1270 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 FOCADQ5VW36 1801 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 UBE4BO95155 1302 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 ALCAMQ13740 583 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 UAP1Q16222 522 aaPredicted RBP9.32□□□□□ -0.92
UBE3B-208ENST00000538070 RHPN2Q8IUC4 686 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 IQCKQ8N0W5 287 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 MCPH1Q8NEM0 835 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 PIK3R5Q8WYR1 880 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 COPS5Q92905 334 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 CLMNQ96JQ2 1002 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 NAP1L3Q99457 506 aaPredicted RBP9.32□□□□□ -0.92
UBE3B-208ENST00000538070 ZSWIM1Q9BR11 485 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 AZI2Q9H6S1 392 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 TBK1Q9UHD2 729 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 PGAP2Q9UHJ9 254 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 CSADQ9Y600 493 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 RPTORQ8N122 1335 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 SPDYE16A6NNV3 312 aaPredicted RBP9.32□□□□□ -0.92
UBE3B-208ENST00000538070 PLA2G6O60733 806 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 MAPTP10636 758 aaKnown RBP9.32□□□□□ -0.92
UBE3B-208ENST00000538070 KCNA4P22459 653 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 TNFSF9P41273 254 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 PSMC4P43686 418 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 DYNLT1P63172 113 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 CUL1Q13616 776 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 MMS22LQ6ZRQ5 1243 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 SRLQ86TD4 932 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 SLC9A9Q8IVB4 645 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 MAP4K3Q8IVH8 894 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 OR5B17Q8NGF7 314 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 ATP8B4Q8TF62 1192 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 ZNF516Q92618 1163 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 HOXC10Q9NYD6 342 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 SYNPO2Q9UMS6 1093 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 STXBP5LQ9Y2K9 1186 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 VGLL3A8MV65 326 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 KIAA0754O94854 1291 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 NCKAP1LP55160 1127 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 ATP13A4Q4VNC1 1196 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 EAPPQ56P03 285 aaPredicted RBP9.32□□□□□ -0.92
UBE3B-208ENST00000538070 TMEM63BQ5T3F8 832 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 DENND2CQ68D51 928 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 RNF149Q8NC42 400 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 MTMR14Q8NCE2 650 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 HELQQ8TDG4 1101 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 IMPG2Q9BZV3 1241 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 ADAM22Q9P0K1 906 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 PNMA2Q9UL42 364 aa9.32□□□□□ -0.92
UBE3B-208ENST00000538070 TTC7AQ9ULT0 858 aaPredicted RBP9.32□□□□□ -0.92
UBE3B-208ENST00000538070 IFNB1P01574 187 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 RARAP10276 462 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 ADCY8P40145 1251 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 RWDD2BP57060 319 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 ZNF844Q08AG5 666 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 IFT88Q13099 833 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 CALCOCO2Q13137 446 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 VGLL4Q14135 290 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 SLC29A2Q14542 456 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 XKR3Q5GH77 459 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 TTC27Q6P3X3 843 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 ZNF572Q7Z3I7 529 aaPredicted RBP9.31□□□□□ -0.92
UBE3B-208ENST00000538070 FAM71AQ8IYT1 594 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 PRELID2Q8N945 189 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 UPF1Q92900 1129 aaKnown RBP eCLIP9.31□□□□□ -0.92
UBE3B-208ENST00000538070 ERP44Q9BS26 406 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 SEMA4AQ9H3S1 761 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 PTPRJQ12913 1337 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 EIF3HO15372 352 aaKnown RBP eCLIP9.31□□□□□ -0.92
UBE3B-208ENST00000538070 SUPT20HL2P0C7V6 817 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 MUTP22033 750 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 GNA15P30679 374 aa9.31□□□□□ -0.92
UBE3B-208ENST00000538070 TCF7P36402 384 aaPredicted RBP9.31□□□□□ -0.92
UBE3B-208ENST00000538070 RPL21P46778 160 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms