RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ANTXR2P58335 489 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 DR1Q01658 176 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 PEX26Q7Z412 305 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 REM2Q8IYK8 340 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 SCYL3Q8IZE3 742 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 SCHIP1Q9P0W5 487 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 HSFX1Q9UBD0 423 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 CCDC162PA2VCL2 907 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 DKC1O60832 514 aaKnown RBP eCLIP11.56□□□□□ -0.564e-8■■■■□ 20.4
CLSTN3-207ENST00000537408 CLCN2P51788 898 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 C1orf228Q6PIY5 440 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 PEX5LQ8IYB4 626 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 SYCE1Q8N0S2 351 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 FNBP1Q96RU3 617 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 EDEM3Q9BZQ6 932 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 PI4KBQ9UBF8 816 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 HBS1LQ9Y450 684 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 RTL9Q8NET4 1388 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 CCDC194A0A1B0GVG4 234 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 GYG2O15488 501 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 YARSP54577 528 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 RAB15P59190 212 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 UBE3CQ15386 1083 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 PKN1Q16512 942 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 CYP4X1Q8N118 509 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 FNDC8Q8TC99 324 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 EPS8L3Q8TE67 593 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 PRPF31Q8WWY3 499 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 SGIP1Q9BQI5 828 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 TMEM106CQ9BVX2 250 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 ZFYVE28Q9HCC9 887 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 DDX18Q9NVP1 670 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 SALL4Q9UJQ4 1053 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 DBR1Q9UK59 544 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 TRAF3IP3Q9Y228 551 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 CACNA1FO60840 1977 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 A8MXQ7 604 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 KRT2P35908 639 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 AP2B1P63010 937 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 NR5A1Q13285 461 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 TAF1CQ15572 869 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 PDXDC1Q6P996 788 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 ACAD11Q709F0 780 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 OTUD6AQ7L8S5 288 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 WDR75Q8IWA0 830 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 NUP93Q8N1F7 819 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 SDR42E1Q8WUS8 393 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 P2RX5Q93086 422 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 VPS50Q96JG6 964 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 ECSITQ9BQ95 431 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 SAR1AQ9NR31 198 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 TCP11L1Q9NUJ3 509 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 A0A1W2PRG0 241 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 CCNE1P24864 410 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 DUS1LQ6P1R4 473 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 CCDC62Q6P9F0 684 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 MIGA2Q7L4E1 593 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 RSPH3Q86UC2 560 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 SH3GL1Q99961 368 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 MLXIPLQ9NP71 852 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 POTEFA5A3E0 1075 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 CA12O43570 354 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 BAG2O95816 211 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 FGAP02671 866 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 IFNAR1P17181 557 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 ASPHQ12797 758 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 RASGRF1Q13972 1273 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 WDR72Q3MJ13 1102 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 FASTKD5Q7L8L6 764 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 GPIHBP1Q8IV16 184 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 ANKS1AQ92625 1134 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 OTUD5Q96G74 571 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 DNAJC1Q96KC8 554 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 HNRNPABQ99729 332 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 EPB41L1Q9H4G0 881 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 PARVBQ9HBI1 364 aa11.55□□□□□ -0.56
CLSTN3-207ENST00000537408 USP17L12C9JPN9 530 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 USP17L21D6R901 530 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 CAPN15O75808 1086 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 ASNSP08243 561 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 PHBP35232 272 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 ZNF76P36508 570 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 C10orf76Q5T2E6 689 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 HHIPL2Q6UWX4 724 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 GET4Q7L5D6 327 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 TRIM51Q9BSJ1 452 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 INIPQ9NRY2 104 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 ZNF70Q9UC06 446 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 UBE2Q2LH0YL09 131 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 DDX3XO00571 662 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 BRAFP15056 766 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 KLRC1P26715 233 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 GIT2Q14161 759 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 IFNL3Q8IZI9 196 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 OSBPL10Q9BXB5 764 aa11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 BMP2KQ9NSY1 1161 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-207ENST00000537408 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms