RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 HAUS6Q7Z4H7 955 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 PIGWQ7Z7B1 504 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 CYP4X1Q8N118 509 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 P2RX7Q99572 595 aaKnown RBP16.93■□□□□ 0.3
MCF2L-232ENST00000535094 IQCGQ9H095 443 aaKnown RBP16.93■□□□□ 0.3
MCF2L-232ENST00000535094 UBN1Q9NPG3 1134 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 SCAF8Q9UPN6 1271 aaKnown RBP16.93■□□□□ 0.3
MCF2L-232ENST00000535094 TESPA1A2RU30 521 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-232ENST00000535094 CDH16O75309 829 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 BAG2O95816 211 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 CCNHP51946 323 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-232ENST00000535094 STAT2P52630 851 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 GPS1Q13098 491 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 FAM182AQ5T1J6 154 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 EMC10Q5UCC4 262 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 TRABDQ9H4I3 376 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 ALS2Q96Q42 1657 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 ALAS1P13196 640 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 YY1P25490 414 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 ECE1P42892 770 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 RCN2Q14257 317 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 TCHPQ9BT92 498 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 C1orf112Q9NSG2 853 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 PTGIRP43119 386 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 NOP14P78316 857 aaKnown RBP16.92■□□□□ 0.3
MCF2L-232ENST00000535094 SPARCL1Q14515 664 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 HYIQ5T013 277 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 ADAM7Q9H2U9 754 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 PRR12Q9ULL5 1215 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 PARP4Q9UKK3 1724 aaKnown RBP16.92■□□□□ 0.3
MCF2L-232ENST00000535094 GLI3P10071 1580 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 PPEF1O14829 653 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-232ENST00000535094 ZSCAN5DPP0CG00 497 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 RRM1P23921 792 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 EPHB2P29323 1055 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 CLK2P49760 499 aaKnown RBP16.92■□□□□ 0.3
MCF2L-232ENST00000535094 CTAGE3PQ8IX95 158 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 GTPBP10A4D1E9 387 aaKnown RBP16.92■□□□□ 0.3
MCF2L-232ENST00000535094 FAM47DPA6NHR8 397 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 EIF2AK2P19525 551 aaKnown RBP16.92■□□□□ 0.3
MCF2L-232ENST00000535094 RASSF2P50749 326 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 SOX10P56693 466 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 CEP55Q53EZ4 464 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 LIN9Q5TKA1 542 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 PLA2G4FQ68DD2 849 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 ZC3H18Q86VM9 953 aaKnown RBP16.92■□□□□ 0.3
MCF2L-232ENST00000535094 SERPINB12Q96P63 405 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 MYLK2Q9H1R3 596 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 ARHGEF10LQ9HCE6 1279 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 CNOT7Q9UIV1 285 aaKnown RBP16.92■□□□□ 0.3
MCF2L-232ENST00000535094 ZFP69BQ9UJL9 534 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 PHTF1Q9UMS5 762 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 ATF5Q9Y2D1 282 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-232ENST00000535094 COL18A1P39060 1754 aa16.92■□□□□ 0.3
MCF2L-232ENST00000535094 BBOX1O75936 387 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 ITIH2P19823 946 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 ZRSR2Q15696 482 aaKnown RBP16.91■□□□□ 0.3
MCF2L-232ENST00000535094 MDH1BQ5I0G3 518 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 ZDHHC14Q8IZN3 488 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 CCDC89Q8N998 374 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 DCAF4Q8WV16 495 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.91■□□□□ 0.39e-7■■■■□ 20.7
MCF2L-232ENST00000535094 RXFP1Q9HBX9 757 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 OLFML3Q9NRN5 406 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 FBXO28Q9NVF7 368 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-232ENST00000535094 AFF2P51816 1311 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 TROVE2P10155 538 aaKnown RBP eCLIP16.91■□□□□ 0.3
MCF2L-232ENST00000535094 MAGEA4P43358 317 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 CPA2P48052 419 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 POU5F1Q01860 360 aaKnown RBP16.91■□□□□ 0.3
MCF2L-232ENST00000535094 BBS9Q3SYG4 887 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 AP1ARQ63HQ0 302 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 CYTH2Q99418 400 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 FAM213AQ9BRX8 229 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 ROPN1BQ9BZX4 212 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-232ENST00000535094 EPB41L4BQ9H329 900 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 UNC45AQ9H3U1 944 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 ROPN1Q9HAT0 212 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-232ENST00000535094 NINJ2Q9NZG7 142 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 STK24Q9Y6E0 443 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 DCCP43146 1447 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 ROBO3Q96MS0 1386 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 CACNA1SQ13698 1873 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 ENTPD5O75356 428 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 SREBF1P36956 1147 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 BTNL9Q6UXG8 535 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 C1orf186Q6ZWK4 172 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 CERS5Q8N5B7 392 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 PPFIBP2Q8ND30 876 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 ATL2Q8NHH9 583 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 TAS1R2Q8TE23 839 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 EPS8L1Q8TE68 723 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 TRAIPQ9BWF2 469 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 SLC12A4Q9UP95 1085 aa16.91■□□□□ 0.3
MCF2L-232ENST00000535094 R3HDM2Q9Y2K5 976 aaKnown RBP16.91■□□□□ 0.3
MCF2L-232ENST00000535094 LUC7L3O95232 432 aaKnown RBP16.9■□□□□ 0.3
MCF2L-232ENST00000535094 CYP11B1P15538 503 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 TTC17Q96AE7 1141 aa16.9■□□□□ 0.3
MCF2L-232ENST00000535094 NAF1Q96HR8 494 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms