RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 PCDHA4Q9UN74 947 aa11.87□□□□□ -0.51
TM9SF1-210ENST00000530563 ITPR1Q14643 2758 aa11.87□□□□□ -0.51
TM9SF1-210ENST00000530563 SF3B1O75533 1304 aaKnown RBP eCLIP11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 PTGESO14684 152 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 NCAM2O15394 837 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 LRP3O75074 770 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 XYLBO75191 536 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 RETP07949 1114 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 ARL2P36404 184 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 NLRP5P59047 1200 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 SPIRE1Q08AE8 756 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 TUSC3Q13454 348 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 CAPSQ13938 189 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 PABPC1LQ4VXU2 614 aaKnown RBP11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 LIN9Q5TKA1 542 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 FAM171A1Q5VUB5 890 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 LAIR1Q6GTX8 287 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 CD300LGQ6UXG3 332 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 CELF5Q8N6W0 485 aaKnown RBP11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 DAGLBQ8NCG7 672 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 SLC7A14Q8TBB6 771 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 NETO1Q8TDF5 533 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 HASPINQ8TF76 798 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 TCP11Q8WWU5 503 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 ING5Q8WYH8 240 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 FAM20AQ96MK3 541 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 LXNQ9BS40 222 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 NFKBIZQ9BYH8 718 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 C22orf23Q9BZE7 217 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 NCOA5Q9HCD5 579 aaKnown RBP11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 AVENQ9NQS1 362 aaPredicted RBP11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 GDE1Q9NZC3 331 aa11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 DDX25Q9UHL0 483 aaKnown RBP11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 RALYQ9UKM9 306 aaKnown RBP11.86□□□□□ -0.51
TM9SF1-210ENST00000530563 TTLL13PA6NNM8 815 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 INO80B-WBP1J3KQ70 363 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 GDF9O60383 454 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 NPTXRO95502 500 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 FGFR3P22607 806 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 PDIA3P30101 505 aaKnown RBP11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 AKAP17AQ02040 695 aaKnown RBP11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 GAS6Q14393 721 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 MXD4Q14582 209 aaPredicted RBP11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 EPHA7Q15375 998 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 LPAL2Q16609 132 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 INF2Q27J81 1249 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 SLC27A1Q6PCB7 646 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 BLIDQ8IZY5 108 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 ELSPBP1Q96BH3 223 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 MCRS1Q96EZ8 462 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 GMEB2Q9UKD1 530 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 POLIQ9UNA4 740 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 COL4A2P08572 1712 aa11.85□□□□□ -0.51
TM9SF1-210ENST00000530563 VWA8A3KMH1 1905 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 CASTOR2A6NHX0 329 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 TM4SF5O14894 197 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 HRO43593 1189 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 DKC1O60832 514 aaKnown RBP eCLIP11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 SLITRK3O94933 977 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 RHOP08100 348 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 CEBPBP17676 345 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 GLRA2P23416 452 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 OR1D2P34982 312 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 NRLP54845 237 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 NCBP1Q09161 790 aaKnown RBP11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 CSRP2Q16527 193 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 XKR9Q5GH70 373 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 PPP4R3AQ6IN85 833 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 RTL10Q7L3V2 364 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 OTUD6AQ7L8S5 288 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 CEP57Q86XR8 500 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 MAP4K3Q8IVH8 894 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 DNASE1L2Q92874 299 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 DYDC2Q96IM9 177 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 MTRQ99707 1265 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 SEMA4GQ9NTN9 838 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 MTRRQ9UBK8 725 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 PARP2Q9UGN5 583 aa11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 MRPS17Q9Y2R5 130 aaKnown RBP11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 MRPS23Q9Y3D9 190 aaKnown RBP11.84□□□□□ -0.51
TM9SF1-210ENST00000530563 IGF2RP11717 2491 aa11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 CCT2P78371 535 aaKnown RBP11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 FGD1P98174 961 aa11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 DMWDQ09019 674 aa11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 CTTNQ14247 550 aaKnown RBP11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 FAM78AQ5JUQ0 283 aa11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 PRSS36Q5K4E3 855 aa11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 PRR23CQ6ZRP0 262 aa11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 HACE1Q8IYU2 909 aa11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 AIFM3Q96NN9 605 aa11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 HSD17B14Q9BPX1 270 aa11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 TRIM6Q9C030 488 aaPredicted RBP11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 ZSWIM4Q9H7M6 989 aa11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 TRPV5Q9NQA5 729 aa11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 SNX14Q9Y5W7 946 aa11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 ARID2Q68CP9 1835 aa11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 LAMA5O15230 3695 aa11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 FASNP49327 2511 aaKnown RBP11.83□□□□□ -0.52
TM9SF1-210ENST00000530563 ARHGEF37A1IGU5 675 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms