RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	GLUD2	P49448	558 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	DSG1	Q02413	1049 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	MCL1	Q07820	350 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	NOLC1	Q14978	699 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	STK38	Q15208	465 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	KIAA0319	Q5VV43	1072 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	RRAGB	Q5VZM2	374 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	ALKAL1	Q6UXT8	129 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	HASPIN	Q8TF76	798 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	ZNF396	Q96N95	335 aa	Predicted RBP	12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	HAPLN2	Q9GZV7	340 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	TOPORS	Q9NS56	1045 aa	Predicted RBP	12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	CHST7	Q9NS84	486 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	CDH22	Q9UJ99	828 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	SF3B1	O75533	1304 aa	Known RBP eCLIP	12.88	□□□□□ -0.35	5e-6	■■■■■ 35.9
PSMC3-205	ENST00000528362	MYMK	A6NI61	221 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	TEX28	O15482	410 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	TRAK2	O60296	914 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	TADA2A	O75478	443 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	PIGR	P01833	764 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	PDIA4	P13667	645 aa	Known RBP	12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	IGFBP6	P24592	240 aa	Predicted RBP	12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	KLRC2	P26717	231 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	CLCN4	P51793	760 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	YARS	P54577	528 aa	Known RBP	12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	SOX4	Q06945	474 aa	Predicted RBP	12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	CBX2	Q14781	532 aa	Predicted RBP	12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	TPRN	Q4KMQ1	711 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	SEZ6	Q53EL9	994 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	KANK3	Q6NY19	840 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	CCDC73	Q6ZRK6	1079 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	DYM	Q7RTS9	669 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	PPFIBP1	Q86W92	1011 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	C12orf76	Q8N812	135 aa	Predicted RBP	12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	FEZF2	Q8TBJ5	459 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	DDX12P	Q92771	950 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	ZMAT2	Q96NC0	199 aa	Known RBP	12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	ACAP3	Q96P50	834 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	POP1	Q99575	1024 aa	Known RBP	12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	PHF7	Q9BWX1	381 aa	Predicted RBP	12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	PANK2	Q9BZ23	570 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	ZHX3	Q9H4I2	956 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	EPHX3	Q9H6B9	360 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	GOLGA2P5	Q9HBQ8	144 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	RXFP1	Q9HBX9	757 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	DZANK1	Q9NVP4	752 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	CNTN3	Q9P232	1028 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	TBX20	Q9UMR3	447 aa		12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	TCF20	Q9UGU0	1960 aa	Known RBP	12.87	□□□□□ -0.35
PSMC3-205	ENST00000528362	CLDN3	O15551	220 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	PPP6R2	O75170	966 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	KCNE1	P15382	129 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	SCP2	P22307	547 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	NMT1	P30419	496 aa	Known RBP	12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	STAT6	P42226	847 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	LIG4	P49917	911 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	USP41	Q3LFD5	358 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	RTP2	Q5QGT7	225 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	KIAA1841	Q6NSI8	718 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	CD300LG	Q6UXG3	332 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	SFR1	Q86XK3	245 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	MAP4K3	Q8IVH8	894 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	GPR65	Q8IYL9	337 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	RIN2	Q8WYP3	895 aa	Predicted RBP	12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	DNAJC19	Q96DA6	116 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	BICD1	Q96G01	975 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	FBXL18	Q96ME1	805 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	ADAM7	Q9H2U9	754 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	SSX2IP	Q9Y2D8	614 aa		12.86	□□□□□ -0.35
PSMC3-205	ENST00000528362	LOC730098	B7Z3J9	87 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	TMEM189-UBE2V1	I3L0A0	370 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	HNRNPDL	O14979	420 aa	Known RBP	12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	FAM189A1	O60320	539 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	B3GAT3	O94766	335 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	ADH1A	P07327	375 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	WEE2	P0C1S8	567 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	CXCL8	P10145	99 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	CLCNKB	P51801	687 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	GTF2B	Q00403	316 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	ITIH3	Q06033	890 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	UPP1	Q16831	310 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	SLC10A6	Q3KNW5	377 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	ZBTB41	Q5SVQ8	909 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	RARS2	Q5T160	578 aa	Known RBP	12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	AXDND1	Q5T1B0	1012 aa	Predicted RBP	12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	SLC39A4	Q6P5W5	647 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	SHC4	Q6S5L8	630 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	PRSS55	Q6UWB4	352 aa	Predicted RBP	12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	SV2B	Q7L1I2	683 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	PDILT	Q8N807	584 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	C3orf58	Q8NDZ4	430 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	UROC1	Q96N76	676 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362	ST6GALNAC4	Q9H4F1	302 aa		12.85	□□□□□ -0.35
PSMC3-205	ENST00000528362		A0A0B4J269	797 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	PI4K2B	G5E9Z4	385 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	CUTA	O60888	179 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	PPP1R37	O75864	691 aa		12.84	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms