RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 NPIPB6E9PJ23 425 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 FAM86B1E9PN63 330 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 IPO5O00410 1097 aaKnown RBP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 TNPO2O14787 897 aaKnown RBP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 NKRFO15226 690 aaKnown RBP eCLIP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 CTAGE5O15320 804 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 DKC1O60832 514 aaKnown RBP eCLIP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 GAS7O60861 476 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 MYL1P05976 194 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 FAM86B2P0C5J1 330 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 ADORA2AP29274 412 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 MARCKSP29966 332 aaPredicted RBP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 SFNP31947 248 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 UBA7P41226 1012 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 ALDH5A1P51649 535 aaPredicted RBP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 LACTBP83111 547 aaPredicted RBP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 SP3Q02447 781 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 FAM160A1Q05DH4 1040 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 MTMR1Q13613 665 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 NEDD9Q14511 834 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 LRRC14Q15048 493 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 CCDC85BQ15834 202 aaPredicted RBP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 KCNA10Q16322 511 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 KLHL40Q2TBA0 621 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 AXDND1Q5T1B0 1012 aaPredicted RBP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 ZBTB37Q5TC79 503 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 RESP18Q5W5W9 173 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 KRT79Q5XKE5 535 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 OLFML2BQ68BL8 750 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 HAUS3Q68CZ6 603 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 FAM173BQ6P4H8 233 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 SLC30A10Q6XR72 485 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 SV2BQ7L1I2 683 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 SMAP1Q8IYB5 467 aaPredicted RBP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 IGSF22Q8N9C0 903 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 IQUBQ8NA54 791 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 ETNPPLQ8TBG4 499 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 NEK9Q8TD19 979 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 SCFD2Q8WU76 684 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 ASB11Q8WXH4 323 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 TBC1D5Q92609 795 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 SLC5A5Q92911 643 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 LENG9Q96B70 501 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 CALML4Q96GE6 196 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 ERO1AQ96HE7 468 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 TIGD1Q96MW7 591 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 FRMD6Q96NE9 622 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 INPP4AQ96PE3 977 aaPredicted RBP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 APBA2Q99767 749 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 SDF4Q9BRK5 362 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 ZNF577Q9BSK1 485 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 GTPBP4Q9BZE4 634 aaKnown RBP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 CCSER1Q9C0I3 900 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 LRRC27Q9C0I9 530 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 NT5C3AQ9H0P0 336 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 PORCNQ9H237 461 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 TNKS2Q9H2K2 1166 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 ABHD16BQ9H3Z7 469 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 CUEDC2Q9H467 287 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 MAGEF1Q9HAY2 307 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 VTA1Q9NP79 307 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 CD320Q9NPF0 282 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 KCNH7Q9NS40 1196 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 LMBRD1Q9NUN5 540 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 DDX19AQ9NUU7 478 aaKnown RBP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 RNF186Q9NXI6 227 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 COL20A1Q9P218 1284 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 PARP2Q9UGN5 583 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 FBXO2Q9UK22 296 aaPredicted RBP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 DDX49Q9Y6V7 483 aaKnown RBP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 BAZ2BQ9UIF8 2168 aaKnown RBP4.28□□□□□ -1.72
C11orf54-204ENST00000527003 PHIPQ8WWQ0 1821 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 ATAD5Q96QE3 1844 aa4.28□□□□□ -1.72
C11orf54-204ENST00000527003 LOC285556D6RIA3 1793 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 NFASCO94856 1347 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 KDM3AQ9Y4C1 1321 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 IGLV3-22A0A075B6J6 115 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 RBM47A0AV96 593 aaKnown RBP4.27□□□□□ -1.73
C11orf54-204ENST00000527003 PRAMEF27A3QJZ7 478 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 VWA3AA6NCI4 1184 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 RBAK-RBAKDNI3L0D1 243 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 ADAMTS3O15072 1205 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 MSH4O15457 936 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 SLC37A4O43826 429 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 EDIL3O43854 480 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 KINO60870 393 aaKnown RBP4.27□□□□□ -1.73
C11orf54-204ENST00000527003 FKTNO75072 461 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 TDP2O95551 362 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 PGK2P07205 417 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 CTSHP09668 335 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 MYCLP12524 364 aaPredicted RBP4.27□□□□□ -1.73
C11orf54-204ENST00000527003 XRCC6P12956 609 aaKnown RBP eCLIP4.27□□□□□ -1.73
C11orf54-204ENST00000527003 HOXA5P20719 270 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 SYKP43405 635 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 PSMC4P43686 418 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 JAK3P52333 1124 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 MRPS9P82933 396 aaKnown RBP4.27□□□□□ -1.73
C11orf54-204ENST00000527003 AMPD3Q01432 767 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 CNTN2Q02246 1040 aa4.27□□□□□ -1.73
C11orf54-204ENST00000527003 ZP2Q05996 745 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms