RNA–Protein interactions for RNA: ENST00000523543.1

CDK16-221, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-221ENST00000523543 UBN1Q9NPG3 1134 aa12.17□□□□□ -0.46
CDK16-221ENST00000523543 TOPORSQ9NS56 1045 aaPredicted RBP12.17□□□□□ -0.46
CDK16-221ENST00000523543 RNF216Q9NWF9 866 aaPredicted RBP12.17□□□□□ -0.46
CDK16-221ENST00000523543 CNTN3Q9P232 1028 aa12.17□□□□□ -0.46
CDK16-221ENST00000523543 CEP290O15078 2479 aa12.17□□□□□ -0.46
CDK16-221ENST00000523543 KCNJ18B7U540 433 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 GOLGA6L19H0YKK7 550 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 ATP1A3P13637 1013 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 KRT13P13646 458 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 KCNE1P15382 129 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 AKAP5P24588 427 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 YARSP54577 528 aaKnown RBP12.16□□□□□ -0.46
CDK16-221ENST00000523543 TPM4P67936 248 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 PPP2R3AQ06190 1150 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 KCNJ12Q14500 433 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 SURF1Q15526 300 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 CCDC40Q4G0X9 1142 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 C1orf220Q5T0J3 134 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 RASIP1Q5U651 963 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 OTOP2Q7RTS6 562 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 APTXQ7Z2E3 356 aaKnown RBP12.16□□□□□ -0.46
CDK16-221ENST00000523543 CD302Q8IX05 232 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 PARD3BQ8TEW8 1205 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 RSPH1Q8WYR4 309 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 LPPQ93052 612 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 TSPAN18Q96SJ8 248 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 APOL6Q9BWW8 343 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 ASB7Q9H672 318 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 RSAD1Q9HA92 442 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 PDE11AQ9HCR9 933 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 MAGEC2Q9UBF1 373 aaPredicted RBP12.16□□□□□ -0.46
CDK16-221ENST00000523543 PARP2Q9UGN5 583 aa12.16□□□□□ -0.46
CDK16-221ENST00000523543 ARL5CA6NH57 179 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 LRRC10BA6NIK2 292 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 LRRIQ3A6PVS8 624 aaPredicted RBP12.15□□□□□ -0.46
CDK16-221ENST00000523543 LACTBL1A8MY62 500 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 PTGESO14684 152 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 HOXA2O43364 376 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 OFD1O75665 1012 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 AMHP03971 560 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 MLH1P40692 756 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 VAMP7P51809 220 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 DEFB103AP81534 67 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 HSP90AA4PQ58FG1 418 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 CLLU1OSQ5K130 101 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 GLB1LQ6UWU2 654 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 USP37Q86T82 979 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 NT5DC4Q86YG4 428 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 WDR49Q8IV35 697 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 RNF169Q8NCN4 708 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 GSTCDQ8NEC7 633 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 TOP1MTQ969P6 601 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 SLC35C1Q96A29 364 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 ZMAT2Q96NC0 199 aaKnown RBP12.15□□□□□ -0.46
CDK16-221ENST00000523543 GAD1Q99259 594 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 CGRRF1Q99675 332 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 GDF15Q99988 308 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 LIMA1Q9UHB6 759 aaKnown RBP12.15□□□□□ -0.46
CDK16-221ENST00000523543 DERAQ9Y315 318 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 C2CD2Q9Y426 696 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 PCDHB7Q9Y5E2 793 aa12.15□□□□□ -0.46
CDK16-221ENST00000523543 PTPRJQ12913 1337 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 H0YGN5 161 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 NFICP08651 508 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 TRIM49P0CI25 452 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 TRIM49CP0CI26 452 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 DLATP10515 647 aaKnown RBP12.14□□□□□ -0.47
CDK16-221ENST00000523543 FGFR1P11362 822 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 GTF2H1P32780 548 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 KCNJ6P48051 423 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 AFF1P51825 1210 aaKnown RBP12.14□□□□□ -0.47
CDK16-221ENST00000523543 DLG4P78352 724 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 KRT31Q15323 416 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 ZBTB6Q15916 424 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 MAN2A1Q16706 1144 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 JADE1Q6IE81 842 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 EFCAB13Q8IY85 973 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 CCDC127Q96BQ5 260 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 ZFP42Q96MM3 310 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 PPP1R10Q96QC0 940 aaKnown RBP12.14□□□□□ -0.47
CDK16-221ENST00000523543 FNBP1Q96RU3 617 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 TUBGCP2Q9BSJ2 902 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 TMEM117Q9H0C3 514 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 CXCL16Q9H2A7 254 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 MTIF3Q9H2K0 278 aaKnown RBP12.14□□□□□ -0.47
CDK16-221ENST00000523543 RC3H2Q9HBD1 1191 aaKnown RBP12.14□□□□□ -0.47
CDK16-221ENST00000523543 KLK14Q9P0G3 267 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 CXXC1Q9P0U4 656 aaPredicted RBP12.14□□□□□ -0.47
CDK16-221ENST00000523543 LRFN2Q9ULH4 789 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 TTC3P53804 2025 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 LAMA3Q16787 3333 aa12.14□□□□□ -0.47
CDK16-221ENST00000523543 MICAL3Q7RTP6 2002 aa12.13□□□□□ -0.47
CDK16-221ENST00000523543 SMIM28A0A1B0GU29 152 aa12.13□□□□□ -0.47
CDK16-221ENST00000523543 FSD2A1L4K1 749 aa12.13□□□□□ -0.47
CDK16-221ENST00000523543 ZBBXA8MT70 800 aa12.13□□□□□ -0.47
CDK16-221ENST00000523543 PMM2O15305 246 aa12.13□□□□□ -0.47
CDK16-221ENST00000523543 IBSPP21815 317 aaPredicted RBP12.13□□□□□ -0.47
CDK16-221ENST00000523543 MTIF2P46199 727 aaKnown RBP12.13□□□□□ -0.47
CDK16-221ENST00000523543 COPB1P53618 953 aaKnown RBP12.13□□□□□ -0.47
CDK16-221ENST00000523543 AP3M2P53677 418 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms