RNA–Protein interactions for RNA: ENST00000522371.5

HDAC2-213, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-213ENST00000522371 ADARB2Q9NS39 739 aaKnown RBP4.33□□□□□ -1.72
HDAC2-213ENST00000522371 MKS1Q9NXB0 559 aa4.33□□□□□ -1.72
HDAC2-213ENST00000522371 KCNG1Q9UIX4 513 aa4.33□□□□□ -1.72
HDAC2-213ENST00000522371 LUC7L2Q9Y383 392 aaKnown RBP4.33□□□□□ -1.72
HDAC2-213ENST00000522371 NUMBLQ9Y6R0 609 aa4.33□□□□□ -1.72
HDAC2-213ENST00000522371 WASHC2AQ641Q2 1341 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 KIAA0355O15063 1070 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 PRPF3O43395 683 aaKnown RBP4.32□□□□□ -1.72
HDAC2-213ENST00000522371 LPXNO60711 386 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 NCR1O76036 304 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 NDUFA10O95299 355 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 SCGB1D2O95969 90 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 LPLP06858 475 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 C21orf58P58505 322 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 PHC1P78364 1004 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 CCT2P78371 535 aaKnown RBP4.32□□□□□ -1.72
HDAC2-213ENST00000522371 BLOC1S1P78537 153 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 FAM189BP81408 668 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 MGAT5Q09328 741 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 KLF1Q13351 362 aaPredicted RBP4.32□□□□□ -1.72
HDAC2-213ENST00000522371 ZBTB41Q5SVQ8 909 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 CCDC62Q6P9F0 684 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 RASSF3Q86WH2 238 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 XYLT1Q86Y38 959 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 CHPFQ8IZ52 775 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 PPM1NQ8N819 430 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 ZNF610Q8N9Z0 462 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 EAF2Q96CJ1 260 aaPredicted RBP4.32□□□□□ -1.72
HDAC2-213ENST00000522371 FAXDC2Q96IV6 333 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 LRGUKQ96M69 825 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 BBC3Q96PG8 261 aaPredicted RBP4.32□□□□□ -1.72
HDAC2-213ENST00000522371 CDC5LQ99459 802 aaKnown RBP4.32□□□□□ -1.72
HDAC2-213ENST00000522371 FDXACB1Q9BRP7 624 aaPredicted RBP4.32□□□□□ -1.72
HDAC2-213ENST00000522371 QRSL1Q9H0R6 528 aaKnown RBP4.32□□□□□ -1.72
HDAC2-213ENST00000522371 SYNPO2LQ9H987 977 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 ANKFY1Q9P2R3 1169 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 GABBR1Q9UBS5 961 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 ZNF180Q9UJW8 692 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 CHST2Q9Y4C5 530 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 COX11Q9Y6N1 276 aa4.32□□□□□ -1.72
HDAC2-213ENST00000522371 COL11A2P13942 1736 aaPredicted RBP4.32□□□□□ -1.72
HDAC2-213ENST00000522371 B5MCH6 92 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 LEFTY2O00292 366 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 PCDHGA12O60330 932 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 SNUPNO95149 360 aaKnown RBP4.31□□□□□ -1.72
HDAC2-213ENST00000522371 LTA4HP09960 611 aaKnown RBP4.31□□□□□ -1.72
HDAC2-213ENST00000522371 CT47B1P0C2W7 299 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-213ENST00000522371 HKR1P10072 659 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 RBP3P10745 1247 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 ZSCAN20P17040 1043 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-213ENST00000522371 IL12RB1P42701 662 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 GPR3P46089 330 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 PTTG1IPP53801 180 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 EPHB1P54762 984 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 RNASE9P60153 205 aaKnown RBP4.31□□□□□ -1.72
HDAC2-213ENST00000522371 MXRA7P84157 204 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 SRSF2Q01130 221 aaKnown RBP4.31□□□□□ -1.72
HDAC2-213ENST00000522371 MEF2AQ02078 507 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-213ENST00000522371 GUCY1B3Q02153 619 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 NHLH2Q02577 135 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 UBE3CQ15386 1083 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 NFE2Q16621 373 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-213ENST00000522371 BEAN1Q3B7T3 259 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 C19orf54Q5BKX5 351 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 TOR2AQ5JU69 321 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 EFCAB12Q6NXP0 572 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 TPH2Q8IWU9 490 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 MSL3Q8N5Y2 521 aaKnown RBP4.31□□□□□ -1.72
HDAC2-213ENST00000522371 C1orf162Q8NEQ5 155 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-213ENST00000522371 JPH3Q8WXH2 748 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-213ENST00000522371 NELL1Q92832 810 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 CAVIN3Q969G5 261 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 CHMP4CQ96CF2 233 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 RTFDC1Q9BY42 306 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-213ENST00000522371 PRDM12Q9H4Q4 367 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 SYBUQ9NX95 663 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 DKK2Q9UBU2 259 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 PCDHGA9Q9Y5G4 932 aaKnown RBP4.31□□□□□ -1.72
HDAC2-213ENST00000522371 PCDHGA8Q9Y5G5 932 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 PCDHGA7Q9Y5G6 932 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 PCDHGA6Q9Y5G7 932 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 PCDHGA3Q9Y5H0 932 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 PCDHGA2Q9Y5H1 932 aa4.31□□□□□ -1.72
HDAC2-213ENST00000522371 PRSS38A1L453 326 aa4.3□□□□□ -1.72
HDAC2-213ENST00000522371 PIPSLA2A3N6 862 aa4.3□□□□□ -1.72
HDAC2-213ENST00000522371 TBKBP1A7MCY6 615 aa4.3□□□□□ -1.72
HDAC2-213ENST00000522371 TSPAN6O43657 245 aa4.3□□□□□ -1.72
HDAC2-213ENST00000522371 OSMP13725 252 aa4.3□□□□□ -1.72
HDAC2-213ENST00000522371 HNRNPA0Q13151 305 aaKnown RBP4.3□□□□□ -1.72
HDAC2-213ENST00000522371 INAVAQ3KP66 663 aa4.3□□□□□ -1.72
HDAC2-213ENST00000522371 HSP90AB2PQ58FF8 381 aa4.3□□□□□ -1.72
HDAC2-213ENST00000522371 ABHD17BQ5VST6 288 aa4.3□□□□□ -1.72
HDAC2-213ENST00000522371 ARMC6Q6NXE6 501 aa4.3□□□□□ -1.72
HDAC2-213ENST00000522371 FRMD7Q6ZUT3 714 aa4.3□□□□□ -1.72
HDAC2-213ENST00000522371 PDZD4Q76G19 769 aaPredicted RBP4.3□□□□□ -1.72
HDAC2-213ENST00000522371 AMOTL1Q8IY63 956 aa4.3□□□□□ -1.72
HDAC2-213ENST00000522371 CMTR2Q8IYT2 770 aaKnown RBP4.3□□□□□ -1.72
HDAC2-213ENST00000522371 NTN5Q8WTR8 489 aaPredicted RBP4.3□□□□□ -1.72
HDAC2-213ENST00000522371 LMBR1Q8WVP7 490 aa4.3□□□□□ -1.72
HDAC2-213ENST00000522371 LINC00476Q8WZB0 136 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms