RNA–Protein interactions for RNA: ENST00000522371.5

HDAC2-213, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-213ENST00000522371 AEBP2Q6ZN18 517 aaPredicted RBP21.56■■□□□ 1.04
HDAC2-213ENST00000522371 CHIC1Q5VXU3 224 aa20.65■□□□□ 0.9
HDAC2-213ENST00000522371 SENP3Q9H4L4 574 aaPredicted RBP18.47■□□□□ 0.55
HDAC2-213ENST00000522371 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
HDAC2-213ENST00000522371 FOXD1Q16676 465 aa17.15■□□□□ 0.34
HDAC2-213ENST00000522371 PLPPR3Q6T4P5 718 aa16.59■□□□□ 0.25
HDAC2-213ENST00000522371 PPP6R1Q9UPN7 881 aa16.09■□□□□ 0.17
HDAC2-213ENST00000522371 PIAS4Q8N2W9 510 aaPredicted RBP16.08■□□□□ 0.16
HDAC2-213ENST00000522371 MSH5O43196 834 aa16.07■□□□□ 0.16
HDAC2-213ENST00000522371 ADRA2BP18089 450 aa16.06■□□□□ 0.16
HDAC2-213ENST00000522371 POTEDQ86YR6 584 aa15.42■□□□□ 0.06
HDAC2-213ENST00000522371 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
HDAC2-213ENST00000522371 MAPK8IP2Q13387 824 aaPredicted RBP14.7□□□□□ -0.06
HDAC2-213ENST00000522371 DMRT2Q9Y5R5 561 aa14.64□□□□□ -0.07
HDAC2-213ENST00000522371 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
HDAC2-213ENST00000522371 CNKSR2Q8WXI2 1034 aa14.26□□□□□ -0.13
HDAC2-213ENST00000522371 HOXD11P31277 338 aaPredicted RBP14.16□□□□□ -0.14
HDAC2-213ENST00000522371 RNF216Q9NWF9 866 aaPredicted RBP14.1□□□□□ -0.15
HDAC2-213ENST00000522371 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
HDAC2-213ENST00000522371 DCAF8L1A6NGE4 600 aa14.04□□□□□ -0.16
HDAC2-213ENST00000522371 NPM3O75607 178 aaKnown RBP13.78□□□□□ -0.2
HDAC2-213ENST00000522371 DNAJC5BQ9UF47 199 aa13.71□□□□□ -0.21
HDAC2-213ENST00000522371 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
HDAC2-213ENST00000522371 RNF39Q9H2S5 420 aa13.68□□□□□ -0.22
HDAC2-213ENST00000522371 KCNA4P22459 653 aa13.6□□□□□ -0.23
HDAC2-213ENST00000522371 C1QBPQ07021 282 aaKnown RBP13.54□□□□□ -0.24
HDAC2-213ENST00000522371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.5□□□□□ -0.25
HDAC2-213ENST00000522371 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
HDAC2-213ENST00000522371 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
HDAC2-213ENST00000522371 CAPN15O75808 1086 aa12.97□□□□□ -0.33
HDAC2-213ENST00000522371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.96□□□□□ -0.33
HDAC2-213ENST00000522371 APLP2Q06481 763 aa12.96□□□□□ -0.33
HDAC2-213ENST00000522371 HNRNPUL2Q1KMD3 747 aaKnown RBP12.96□□□□□ -0.33
HDAC2-213ENST00000522371 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
HDAC2-213ENST00000522371 SLC4A1APQ9BWU0 796 aaKnown RBP12.91□□□□□ -0.34
HDAC2-213ENST00000522371 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
HDAC2-213ENST00000522371 DSG3P32926 999 aa12.85□□□□□ -0.35
HDAC2-213ENST00000522371 ZNF219Q9P2Y4 722 aaPredicted RBP12.8□□□□□ -0.36
HDAC2-213ENST00000522371 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
HDAC2-213ENST00000522371 TRHP20396 242 aaPredicted RBP12.78□□□□□ -0.36
HDAC2-213ENST00000522371 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
HDAC2-213ENST00000522371 ABCB7O75027 752 aa12.63□□□□□ -0.39
HDAC2-213ENST00000522371 POLA2Q14181 598 aa12.47□□□□□ -0.41
HDAC2-213ENST00000522371 ZBTB22O15209 634 aa12.46□□□□□ -0.41
HDAC2-213ENST00000522371 ATF5Q9Y2D1 282 aaPredicted RBP12.4□□□□□ -0.42
HDAC2-213ENST00000522371 ATXN8OSP0DMR3 200 aa12.34□□□□□ -0.43
HDAC2-213ENST00000522371 RBM42Q9BTD8 480 aaKnown RBP12.33□□□□□ -0.44
HDAC2-213ENST00000522371 ZBTB12Q9Y330 459 aaPredicted RBP12.29□□□□□ -0.44
HDAC2-213ENST00000522371 POTEHQ6S545 545 aa12.13□□□□□ -0.47
HDAC2-213ENST00000522371 CSRNP3Q8WYN3 585 aa12.04□□□□□ -0.48
HDAC2-213ENST00000522371 AKT1S1Q96B36 256 aa12.04□□□□□ -0.48
HDAC2-213ENST00000522371 OSCARQ8IYS5 282 aa12.03□□□□□ -0.48
HDAC2-213ENST00000522371 FBLN2P98095 1184 aa12.02□□□□□ -0.49
HDAC2-213ENST00000522371 CHRDL2Q6WN34 429 aa11.96□□□□□ -0.49
HDAC2-213ENST00000522371 EHMT2Q96KQ7 1210 aa11.93□□□□□ -0.5
HDAC2-213ENST00000522371 SPDYE2BA6NHP3 402 aa11.89□□□□□ -0.51
HDAC2-213ENST00000522371 SPDYE6P0CI01 402 aa11.89□□□□□ -0.51
HDAC2-213ENST00000522371 SPDYE2Q495Y8 402 aa11.89□□□□□ -0.51
HDAC2-213ENST00000522371 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
HDAC2-213ENST00000522371 MKRN4PQ13434 485 aaPredicted RBP11.85□□□□□ -0.51
HDAC2-213ENST00000522371 ZNF692Q9BU19 519 aaPredicted RBP11.76□□□□□ -0.53
HDAC2-213ENST00000522371 PITPNM1O00562 1244 aa11.74□□□□□ -0.53
HDAC2-213ENST00000522371 SSUH2Q9Y2M2 353 aa11.7□□□□□ -0.54
HDAC2-213ENST00000522371 PIP4P2Q8N4L2 257 aa11.68□□□□□ -0.54
HDAC2-213ENST00000522371 SPDYE1Q8NFV5 336 aaPredicted RBP11.65□□□□□ -0.54
HDAC2-213ENST00000522371 FXR2P51116 673 aaKnown RBP eCLIP11.64□□□□□ -0.552e-7■■■□□ 17.7
HDAC2-213ENST00000522371 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
HDAC2-213ENST00000522371 PABPN1Q86U42 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
HDAC2-213ENST00000522371 HAX1O00165 279 aa11.47□□□□□ -0.57
HDAC2-213ENST00000522371 PRKAR2AP13861 404 aaKnown RBP11.47□□□□□ -0.57
HDAC2-213ENST00000522371 PRR29P0C7W0 189 aa11.46□□□□□ -0.57
HDAC2-213ENST00000522371 SP7Q8TDD2 431 aaPredicted RBP11.43□□□□□ -0.58
HDAC2-213ENST00000522371 SPDYE4A6NLX3 237 aa11.4□□□□□ -0.58
HDAC2-213ENST00000522371 STAG3Q9UJ98 1225 aa11.34□□□□□ -0.59
HDAC2-213ENST00000522371 CHADLQ6NUI6 762 aa11.33□□□□□ -0.6
HDAC2-213ENST00000522371 C19orf67A6NJJ6 358 aa11.26□□□□□ -0.61
HDAC2-213ENST00000522371 EVX2Q03828 476 aa11.26□□□□□ -0.61
HDAC2-213ENST00000522371 FARP1Q9Y4F1 1045 aaPredicted RBP11.22□□□□□ -0.61
HDAC2-213ENST00000522371 CREBZFQ9NS37 354 aa11.14□□□□□ -0.63
HDAC2-213ENST00000522371 PROM2Q8N271 834 aa11.12□□□□□ -0.63
HDAC2-213ENST00000522371 CD44P16070 742 aaKnown RBP11.11□□□□□ -0.63
HDAC2-213ENST00000522371 GABBR2O75899 941 aa11.07□□□□□ -0.64
HDAC2-213ENST00000522371 CLCN6P51797 869 aa11.05□□□□□ -0.64
HDAC2-213ENST00000522371 NPM1P06748 294 aaKnown RBP eCLIP11.02□□□□□ -0.65
HDAC2-213ENST00000522371 ZRANB1Q9UGI0 708 aa10.98□□□□□ -0.65
HDAC2-213ENST00000522371 PAK3O75914 559 aaPredicted RBP10.97□□□□□ -0.65
HDAC2-213ENST00000522371 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
HDAC2-213ENST00000522371 ZNF579Q8NAF0 562 aaKnown RBP10.95□□□□□ -0.66
HDAC2-213ENST00000522371 PLEKHG5O94827 1062 aa10.94□□□□□ -0.66
HDAC2-213ENST00000522371 FKBP8Q14318 412 aa10.93□□□□□ -0.66
HDAC2-213ENST00000522371 MIER1Q8N108 512 aa10.89□□□□□ -0.67
HDAC2-213ENST00000522371 DCBLD2Q96PD2 775 aa10.84□□□□□ -0.67
HDAC2-213ENST00000522371 PLCD3Q8N3E9 789 aa10.81□□□□□ -0.68
HDAC2-213ENST00000522371 POTEIP0CG38 1075 aa10.79□□□□□ -0.68
HDAC2-213ENST00000522371 PHF12Q96QT6 1004 aa10.79□□□□□ -0.68
HDAC2-213ENST00000522371 GALR2O43603 387 aaPredicted RBP10.78□□□□□ -0.68
HDAC2-213ENST00000522371 ZBTB47Q9UFB7 747 aaPredicted RBP10.78□□□□□ -0.68
HDAC2-213ENST00000522371 TSPYL2Q9H2G4 693 aaPredicted RBP10.76□□□□□ -0.69
HDAC2-213ENST00000522371 FBXO3Q9UK99 471 aa10.75□□□□□ -0.69
HDAC2-213ENST00000522371 LHX8Q68G74 356 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms