RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 OTOP2Q7RTS6 562 aa8.76□□□□□ -1.01
SDCBP-208ENST00000520228 ZSCAN18Q8TBC5 510 aaPredicted RBP8.76□□□□□ -1.01
SDCBP-208ENST00000520228 EAF2Q96CJ1 260 aaPredicted RBP8.76□□□□□ -1.01
SDCBP-208ENST00000520228 TEX13AQ9BXU3 409 aaPredicted RBP8.76□□□□□ -1.01
SDCBP-208ENST00000520228 MIS18AQ9NYP9 233 aa8.76□□□□□ -1.01
SDCBP-208ENST00000520228 CDC42EP3Q9UKI2 254 aa8.76□□□□□ -1.01
SDCBP-208ENST00000520228 KAT6BQ8WYB5 2073 aa8.76□□□□□ -1.01
SDCBP-208ENST00000520228 TRIM75PA6NK02 468 aa8.75□□□□□ -1.01
SDCBP-208ENST00000520228 FZD9O00144 591 aa8.75□□□□□ -1.01
SDCBP-208ENST00000520228 NOBOXO60393 691 aa8.75□□□□□ -1.01
SDCBP-208ENST00000520228 TRIM13O60858 407 aa8.75□□□□□ -1.01
SDCBP-208ENST00000520228 PCDH8O95206 1070 aa8.75□□□□□ -1.01
SDCBP-208ENST00000520228 CYP1A1P04798 512 aaPredicted RBP8.75□□□□□ -1.01
SDCBP-208ENST00000520228 CSF2RBP32927 897 aa8.75□□□□□ -1.01
SDCBP-208ENST00000520228 RFC4P35249 363 aa8.75□□□□□ -1.01
SDCBP-208ENST00000520228 LCNL1Q6ZST4 164 aa8.75□□□□□ -1.01
SDCBP-208ENST00000520228 HEG1Q9ULI3 1381 aa8.74□□□□□ -1.01
SDCBP-208ENST00000520228 A0A0A6YYK5 440 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-208ENST00000520228 APAF1O14727 1248 aa8.74□□□□□ -1.01
SDCBP-208ENST00000520228 H2AFYO75367 372 aaKnown RBP8.74□□□□□ -1.01
SDCBP-208ENST00000520228 CELA3BP08861 270 aa8.74□□□□□ -1.01
SDCBP-208ENST00000520228 SNRPA1P09661 255 aaKnown RBP8.74□□□□□ -1.01
SDCBP-208ENST00000520228 IARSP41252 1262 aaKnown RBP8.74□□□□□ -1.01
SDCBP-208ENST00000520228 KCNQ1P51787 676 aa8.74□□□□□ -1.01
SDCBP-208ENST00000520228 UGT8Q16880 541 aa8.74□□□□□ -1.01
SDCBP-208ENST00000520228 LARP4Q71RC2 724 aaKnown RBP eCLIP8.74□□□□□ -1.01
SDCBP-208ENST00000520228 KCNK18Q7Z418 384 aa8.74□□□□□ -1.01
SDCBP-208ENST00000520228 SIAH1Q8IUQ4 282 aa8.74□□□□□ -1.01
SDCBP-208ENST00000520228 PPP1R14CQ8TAE6 165 aa8.74□□□□□ -1.01
SDCBP-208ENST00000520228 TGFBRAP1Q8WUH2 860 aa8.74□□□□□ -1.01
SDCBP-208ENST00000520228 RSAD2Q8WXG1 361 aa8.74□□□□□ -1.01
SDCBP-208ENST00000520228 NKD2Q969F2 451 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-208ENST00000520228 LCORQ96JN0 433 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-208ENST00000520228 SOX7Q9BT81 388 aa8.74□□□□□ -1.01
SDCBP-208ENST00000520228 BARX1Q9HBU1 254 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-208ENST00000520228 PRSS50Q9UI38 385 aa8.74□□□□□ -1.01
SDCBP-208ENST00000520228 MAGEL2Q9UJ55 1249 aa8.74□□□□□ -1.01
SDCBP-208ENST00000520228 PCDHB6Q9Y5E3 794 aa8.74□□□□□ -1.01
SDCBP-208ENST00000520228 TNKSO95271 1327 aa8.74□□□□□ -1.01
SDCBP-208ENST00000520228 MROH6A6NGR9 719 aa8.73□□□□□ -1.01
SDCBP-208ENST00000520228 MAFGO15525 162 aa8.73□□□□□ -1.01
SDCBP-208ENST00000520228 HMGCRP04035 888 aa8.73□□□□□ -1.01
SDCBP-208ENST00000520228 LPLP06858 475 aa8.73□□□□□ -1.01
SDCBP-208ENST00000520228 ZSCAN22P10073 491 aaPredicted RBP8.73□□□□□ -1.01
SDCBP-208ENST00000520228 KCNC1P48547 511 aa8.73□□□□□ -1.01
SDCBP-208ENST00000520228 GPR15P49685 360 aa8.73□□□□□ -1.01
SDCBP-208ENST00000520228 C1orf162Q8NEQ5 155 aaPredicted RBP8.73□□□□□ -1.01
SDCBP-208ENST00000520228 NOL10Q9BSC4 688 aaKnown RBP8.73□□□□□ -1.01
SDCBP-208ENST00000520228 KCTD10Q9H3F6 313 aa8.73□□□□□ -1.01
SDCBP-208ENST00000520228 GOLGA2P5Q9HBQ8 144 aa8.73□□□□□ -1.01
SDCBP-208ENST00000520228 CCM2LQ9NUG4 571 aaPredicted RBP8.73□□□□□ -1.01
SDCBP-208ENST00000520228 SAE1Q9UBE0 346 aaPredicted RBP8.73□□□□□ -1.01
SDCBP-208ENST00000520228 TSPYL4Q9UJ04 414 aa8.73□□□□□ -1.01
SDCBP-208ENST00000520228 ZBTB1Q9Y2K1 713 aa8.73□□□□□ -1.01
SDCBP-208ENST00000520228 LY75O60449 1722 aa8.73□□□□□ -1.01
SDCBP-208ENST00000520228 KCPQ6ZWJ8 1503 aa8.73□□□□□ -1.01
SDCBP-208ENST00000520228 A1BGP04217 495 aa8.72□□□□□ -1.01
SDCBP-208ENST00000520228 STAT5BP51692 787 aa8.72□□□□□ -1.01
SDCBP-208ENST00000520228 EIF4A1P60842 406 aaKnown RBP8.72□□□□□ -1.01
SDCBP-208ENST00000520228 MRPS9P82933 396 aaKnown RBP8.72□□□□□ -1.01
SDCBP-208ENST00000520228 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.72□□□□□ -1.01
SDCBP-208ENST00000520228 ABCB5Q2M3G0 1257 aa8.72□□□□□ -1.01
SDCBP-208ENST00000520228 PLEKHG6Q3KR16 790 aa8.72□□□□□ -1.01
SDCBP-208ENST00000520228 CCDC178Q5BJE1 867 aa8.72□□□□□ -1.01
SDCBP-208ENST00000520228 KRTAP19-1Q8IUB9 90 aa8.72□□□□□ -1.01
SDCBP-208ENST00000520228 CDYL2Q8N8U2 506 aa8.72□□□□□ -1.01
SDCBP-208ENST00000520228 DYDC2Q96IM9 177 aa8.72□□□□□ -1.01
SDCBP-208ENST00000520228 POLR3BQ9NW08 1133 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-208ENST00000520228 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.72□□□□□ -1.01
SDCBP-208ENST00000520228 BABAM1Q9NWV8 329 aa8.72□□□□□ -1.01
SDCBP-208ENST00000520228 VWA7Q9Y334 891 aa8.72□□□□□ -1.01
SDCBP-208ENST00000520228 SPEF1Q9Y4P9 236 aa8.72□□□□□ -1.01
SDCBP-208ENST00000520228 LAS1LQ9Y4W2 734 aaKnown RBP8.72□□□□□ -1.01
SDCBP-208ENST00000520228 USP16Q9Y5T5 823 aa8.72□□□□□ -1.01
SDCBP-208ENST00000520228 ITGB4P16144 1822 aa8.72□□□□□ -1.01
SDCBP-208ENST00000520228 SOS1Q07889 1333 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-208ENST00000520228 ADAMTS7Q9UKP4 1686 aa8.72□□□□□ -1.01
SDCBP-208ENST00000520228 C4BP0C0L5 1744 aa8.71□□□□□ -1.01
SDCBP-208ENST00000520228 SEC24DO94855 1032 aaPredicted RBP8.71□□□□□ -1.02
SDCBP-208ENST00000520228 MMP10P09238 476 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 ZNF888P0CJ79 500 aaPredicted RBP8.71□□□□□ -1.02
SDCBP-208ENST00000520228 RBP3P10745 1247 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 GYS1P13807 737 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 MTNR1BP49286 362 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 KRT85P78386 507 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 CALD1Q05682 793 aaKnown RBP8.71□□□□□ -1.02
SDCBP-208ENST00000520228 KRTAP19-4Q3LI73 84 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 SP8Q8IXZ3 490 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 OR14C36Q8NHC7 312 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 GAB3Q8WWW8 586 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 RAX2Q96IS3 184 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 FAXDC2Q96IV6 333 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 HIST1H2AHQ96KK5 128 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 KCNC2Q96PR1 638 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 HIST1H2AJQ99878 128 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 KRTAP4-12Q9BQ66 201 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 FDXACB1Q9BRP7 624 aaPredicted RBP8.71□□□□□ -1.02
SDCBP-208ENST00000520228 SYT17Q9BSW7 474 aa8.71□□□□□ -1.02
SDCBP-208ENST00000520228 SRP68Q9UHB9 627 aaKnown RBP8.71□□□□□ -1.02
SDCBP-208ENST00000520228 PTPN22Q9Y2R2 807 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms