RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 PPM1LQ5SGD2 360 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 EEF1DP3Q658K8 133 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 PRSS55Q6UWB4 352 aaPredicted RBP11.96□□□□□ -0.49
PVT1-208ENST00000519481 GET4Q7L5D6 327 aaPredicted RBP11.96□□□□□ -0.49
PVT1-208ENST00000519481 SIX5Q8N196 739 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 ZNF707Q96C28 371 aaPredicted RBP11.96□□□□□ -0.49
PVT1-208ENST00000519481 DRC1Q96MC2 740 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 UROC1Q96N76 676 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 MYADMQ96S97 322 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 PAAF1Q9BRP4 392 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 CCDC94Q9BW85 323 aaPredicted RBP11.96□□□□□ -0.49
PVT1-208ENST00000519481 TOPORSQ9NS56 1045 aaPredicted RBP11.96□□□□□ -0.49
PVT1-208ENST00000519481 CACNG4Q9UBN1 327 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 ZFP37Q9Y6Q3 630 aaPredicted RBP11.96□□□□□ -0.49
PVT1-208ENST00000519481 TTLL13PA6NNM8 815 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 XYLBO75191 536 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 B3GAT3O94766 335 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 AOC1P19801 751 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 U2AF2P26368 475 aaKnown RBP eCLIP11.95□□□□□ -0.51e-10■■■□□ 17.9
PVT1-208ENST00000519481 PEX3P56589 373 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 DMP1Q13316 513 aaPredicted RBP11.95□□□□□ -0.5
PVT1-208ENST00000519481 NBR1Q14596 966 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 DCLRE1AQ6PJP8 1040 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.95□□□□□ -0.5
PVT1-208ENST00000519481 DTHD1Q6ZMT9 781 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 C4orf32Q8N8J7 132 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 LNX1Q8TBB1 728 aaPredicted RBP11.95□□□□□ -0.5
PVT1-208ENST00000519481 KIFC3Q9BVG8 833 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 MRPL4Q9BYD3 311 aaKnown RBP11.95□□□□□ -0.5
PVT1-208ENST00000519481 POLD4Q9HCU8 107 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 WNT16Q9UBV4 365 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 KCNG1Q9UIX4 513 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 FBXW11Q9UKB1 542 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 TNFSF13BQ9Y275 285 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 USP20Q9Y2K6 914 aa11.95□□□□□ -0.5
PVT1-208ENST00000519481 RBM19Q9Y4C8 960 aaKnown RBP11.95□□□□□ -0.5
PVT1-208ENST00000519481 C2orf16Q68DN1 1984 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 ZFHX2Q9C0A1 2572 aaPredicted RBP11.94□□□□□ -0.5
PVT1-208ENST00000519481 PLXNA3P51805 1871 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 TMEM189-UBE2V1I3L0A0 370 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 N4BP1O75113 896 aaKnown RBP11.94□□□□□ -0.5
PVT1-208ENST00000519481 PAPLNO95428 1278 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 C8AP07357 584 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 CFHP08603 1231 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 SRFP11831 508 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 LAMP2P13473 410 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 FSHRP23945 695 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 HOXA9P31269 272 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 PRPHP41219 470 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 ECM1Q16610 540 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 ZNF568Q3ZCX4 644 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 NT5DC1Q5TFE4 455 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 MCTP1Q6DN14 999 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 RTL10Q7L3V2 364 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 SLC44A3Q8N4M1 653 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 IGSF22Q8N9C0 903 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 RSAD2Q8WXG1 361 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 DDX27Q96GQ7 796 aaKnown RBP11.94□□□□□ -0.5
PVT1-208ENST00000519481 CLSTN3Q9BQT9 956 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 TCHPQ9BT92 498 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 TIPINQ9BVW5 301 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 TMEM134Q9H6X4 195 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 C17orf75Q9HAS0 396 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 KMT5AQ9NQR1 393 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 SLC38A7Q9NVC3 462 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 POLIQ9UNA4 740 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 PCDHB6Q9Y5E3 794 aa11.94□□□□□ -0.5
PVT1-208ENST00000519481 PTPRZ1P23471 2315 aaPredicted RBP11.93□□□□□ -0.5
PVT1-208ENST00000519481 PROB1E7EW31 1015 aa11.93□□□□□ -0.5
PVT1-208ENST00000519481 E9PMD0 336 aa11.93□□□□□ -0.5
PVT1-208ENST00000519481 NARSO43776 548 aaKnown RBP11.93□□□□□ -0.5
PVT1-208ENST00000519481 HIP1RO75146 1068 aa11.93□□□□□ -0.5
PVT1-208ENST00000519481 CENPBP07199 599 aaPredicted RBP11.93□□□□□ -0.5
PVT1-208ENST00000519481 OR1D2P34982 312 aa11.93□□□□□ -0.5
PVT1-208ENST00000519481 GRM5P41594 1212 aa11.93□□□□□ -0.5
PVT1-208ENST00000519481 NPTX2P47972 431 aa11.93□□□□□ -0.5
PVT1-208ENST00000519481 STRN3Q13033 797 aa11.93□□□□□ -0.5
PVT1-208ENST00000519481 RAB33AQ14088 237 aa11.93□□□□□ -0.5
PVT1-208ENST00000519481 RABEP1Q15276 862 aa11.93□□□□□ -0.5
PVT1-208ENST00000519481 ZRSR1Q15695 479 aaKnown RBP11.93□□□□□ -0.5
PVT1-208ENST00000519481 NAB2Q15742 525 aa11.93□□□□□ -0.5
PVT1-208ENST00000519481 UVSSAQ2YD98 709 aa11.93□□□□□ -0.5
PVT1-208ENST00000519481 GLRA4Q5JXX5 417 aa11.93□□□□□ -0.5
PVT1-208ENST00000519481 AXDND1Q5T1B0 1012 aaPredicted RBP11.93□□□□□ -0.5
PVT1-208ENST00000519481 CWF19L1Q69YN2 538 aaKnown RBP11.93□□□□□ -0.5
PVT1-208ENST00000519481 ANKS3Q6ZW76 656 aa11.93□□□□□ -0.5
PVT1-208ENST00000519481 GRASPQ7Z6J2 395 aaPredicted RBP11.93□□□□□ -0.5
PVT1-208ENST00000519481 ACAP3Q96P50 834 aa11.93□□□□□ -0.5
PVT1-208ENST00000519481 PPP1R10Q96QC0 940 aaKnown RBP11.93□□□□□ -0.5
PVT1-208ENST00000519481 ACO2Q99798 780 aaKnown RBP11.93□□□□□ -0.5
PVT1-208ENST00000519481 MTCL1Q9Y4B5 1905 aaKnown RBP11.93□□□□□ -0.5
PVT1-208ENST00000519481 H3BQV1 296 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 CCL16O15467 120 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 EDN1P05305 212 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 MCF2P10911 925 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 NPR3P17342 541 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 FGFR3P22607 806 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 ELF1P32519 619 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 NBL1P41271 181 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 TOB1P50616 345 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms