RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 GNAT1P11488 350 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 CYBAP13498 195 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 PIK3CAP42336 1068 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 ACOT2P49753 483 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 PSEN2P49810 448 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 GCNT1Q02742 428 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 ARID5AQ03989 594 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 PTK2Q05397 1052 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 KIAA0753Q2KHM9 967 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 WDR44Q5JSH3 913 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 PRAMEF19Q5SWL8 479 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 PHLDB3Q6NSJ2 640 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 NFRKBQ6P4R8 1299 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 GJB7Q6PEY0 223 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 SV2AQ7L0J3 742 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 RNF10Q8N5U6 811 aaKnown RBP12.9□□□□□ -0.34
LMNA-224ENST00000515711 LMBR1Q8WVP7 490 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 NLRP7Q8WX94 980 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 SECISBP2LQ93073 1101 aaKnown RBP12.9□□□□□ -0.34
LMNA-224ENST00000515711 SCLT1Q96NL6 688 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 ALS2CR12Q96Q35 445 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 NAPGQ99747 312 aaPredicted RBP12.9□□□□□ -0.34
LMNA-224ENST00000515711 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.9□□□□□ -0.34
LMNA-224ENST00000515711 HAPLN2Q9GZV7 340 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 IFT122Q9HBG6 1241 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 SPC25Q9HBM1 224 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 PTPRHQ9HD43 1115 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 UBE2TQ9NPD8 197 aaPredicted RBP12.9□□□□□ -0.34
LMNA-224ENST00000515711 AJAP1Q9UKB5 411 aaPredicted RBP12.9□□□□□ -0.34
LMNA-224ENST00000515711 INTUQ9ULD6 942 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 GUCA1BQ9UMX6 200 aa12.9□□□□□ -0.34
LMNA-224ENST00000515711 PDCD11Q14690 1871 aaKnown RBP12.9□□□□□ -0.34
LMNA-224ENST00000515711 A0A087WZ62 844 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 ANO9A1A5B4 782 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 ZNF263O14978 683 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 FAM189A1O60320 539 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 TACC1O75410 805 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 ERLIN2O94905 339 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 RPLP2P05387 115 aaKnown RBP12.89□□□□□ -0.35
LMNA-224ENST00000515711 MYL3P08590 195 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 HARSP12081 509 aaKnown RBP12.89□□□□□ -0.35
LMNA-224ENST00000515711 CTGFP29279 349 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 GJA9P57773 515 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 NKX3-2P78367 333 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 CYP27A1Q02318 531 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 GFPT1Q06210 699 aaPredicted RBP12.89□□□□□ -0.35
LMNA-224ENST00000515711 FSCN1Q16658 493 aaKnown RBP12.89□□□□□ -0.35
LMNA-224ENST00000515711 MARCH8Q5T0T0 291 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 ARHGEF19Q8IW93 802 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 SLC35F6Q8N357 371 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 PPM1KQ8N3J5 372 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 DEFB123Q8N688 67 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 TRIM58Q8NG06 486 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 SH3TC2Q8TF17 1288 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 DHX38Q92620 1227 aaKnown RBP12.89□□□□□ -0.35
LMNA-224ENST00000515711 ZBTB45Q96K62 511 aaPredicted RBP12.89□□□□□ -0.35
LMNA-224ENST00000515711 WDR24Q96S15 920 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 FDXACB1Q9BRP7 624 aaPredicted RBP12.89□□□□□ -0.35
LMNA-224ENST00000515711 GCOM2Q9BZD3 368 aaPredicted RBP12.89□□□□□ -0.35
LMNA-224ENST00000515711 IMPG2Q9BZV3 1241 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 GPR88Q9GZN0 384 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 UPF3AQ9H1J1 476 aaKnown RBP12.89□□□□□ -0.35
LMNA-224ENST00000515711 CPSF3Q9UKF6 684 aaKnown RBP12.89□□□□□ -0.35
LMNA-224ENST00000515711 FRMPD3Q5JV73 1810 aa12.89□□□□□ -0.35
LMNA-224ENST00000515711 DYNC1I1O14576 645 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 URI1O94763 535 aaPredicted RBP12.88□□□□□ -0.35
LMNA-224ENST00000515711 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
LMNA-224ENST00000515711 SLU7O95391 586 aaKnown RBP12.88□□□□□ -0.35
LMNA-224ENST00000515711 GNRH1P01148 92 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 C4BPAP04003 597 aaKnown RBP12.88□□□□□ -0.35
LMNA-224ENST00000515711 VTNP04004 478 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 TBXAS1P24557 533 aaPredicted RBP12.88□□□□□ -0.35
LMNA-224ENST00000515711 HOXD10P28358 340 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 SP3Q02447 781 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 NCBP1Q09161 790 aaKnown RBP12.88□□□□□ -0.35
LMNA-224ENST00000515711 BIRC3Q13489 604 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 NAB2Q15742 525 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 IFI16Q16666 785 aaKnown RBP12.88□□□□□ -0.35
LMNA-224ENST00000515711 ARHGAP44Q17R89 818 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 DCAF4L1Q3SXM0 396 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 ZNF571Q7Z3V5 609 aaPredicted RBP12.88□□□□□ -0.35
LMNA-224ENST00000515711 ZBTB33Q86T24 672 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.88□□□□□ -0.35
LMNA-224ENST00000515711 KIAA0319LQ8IZA0 1049 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 TAS1R2Q8TE23 839 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 TRIB2Q92519 343 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 SHC3Q92529 594 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 KAT2BQ92831 832 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 CALR3Q96L12 384 aaKnown RBP12.88□□□□□ -0.35
LMNA-224ENST00000515711 ADPGKQ9BRR6 497 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 CDT1Q9H211 546 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 PDE11AQ9HCR9 933 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 PRDM6Q9NQX0 595 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 TOPORSQ9NS56 1045 aaPredicted RBP12.88□□□□□ -0.35
LMNA-224ENST00000515711 STXBP5LQ9Y2K9 1186 aa12.88□□□□□ -0.35
LMNA-224ENST00000515711 TRIP12Q14669 1992 aaPredicted RBP12.88□□□□□ -0.35
LMNA-224ENST00000515711 VCANP13611 3396 aa12.87□□□□□ -0.35
LMNA-224ENST00000515711 MYH10P35580 1976 aa12.87□□□□□ -0.35
LMNA-224ENST00000515711 A0A087X0T9 212 aa12.87□□□□□ -0.35
LMNA-224ENST00000515711 A0A0U1RQJ8 604 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms