RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 CENPFP49454 3210 aa11.02□□□□□ -0.64
SNF8-214ENST00000515174 A0A1W2PPC1 479 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 DDX3XO00571 662 aaKnown RBP eCLIP11.02□□□□□ -0.651e-10■□□□□ 9
SNF8-214ENST00000515174 OGTO15294 1046 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 FAM189A1O60320 539 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 MMP3P08254 477 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 ZNF865P0CJ78 1059 aaPredicted RBP11.02□□□□□ -0.65
SNF8-214ENST00000515174 KLRC1P26715 233 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 MARK3P27448 753 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 TNFAIP2Q03169 654 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 ITIH3Q06033 890 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 DRP2Q13474 957 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 KIAA0753Q2KHM9 967 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 TMEM63BQ5T3F8 832 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 GJB7Q6PEY0 223 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 RSRC2Q7L4I2 434 aaKnown RBP11.02□□□□□ -0.65
SNF8-214ENST00000515174 SRGAP1Q7Z6B7 1085 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 TRIM50Q86XT4 487 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 BRSK2Q8IWQ3 736 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 RNF149Q8NC42 400 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 SLAIN1Q8ND83 568 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 MNS1Q8NEH6 495 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 ZNF516Q92618 1163 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 SEMA4DQ92854 862 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 CCDC127Q96BQ5 260 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 NT5C1BQ96P26 610 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 ALS2CR12Q96Q35 445 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 MAP7D2Q96T17 732 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 CGRRF1Q99675 332 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 MSTO1Q9BUK6 570 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 UNC93B1Q9H1C4 597 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 SUGCTQ9HAC7 445 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 RNF14Q9UBS8 474 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 TRIM10Q9UDY6 481 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 ZHX1Q9UKY1 873 aaPredicted RBP11.02□□□□□ -0.65
SNF8-214ENST00000515174 TNFSF13BQ9Y275 285 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 SAR1BQ9Y6B6 198 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 DUSP10Q9Y6W6 482 aa11.02□□□□□ -0.65
SNF8-214ENST00000515174 SOX1O00570 391 aaPredicted RBP11.01□□□□□ -0.65
SNF8-214ENST00000515174 PRKCBP05771 671 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 TUBBP07437 444 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 H2AFZP0C0S5 128 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 TCP1P17987 556 aaKnown RBP11.01□□□□□ -0.65
SNF8-214ENST00000515174 PHKA2P46019 1235 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 HADHBP55084 474 aaKnown RBP11.01□□□□□ -0.65
SNF8-214ENST00000515174 NLRP11P59045 1033 aaKnown RBP11.01□□□□□ -0.65
SNF8-214ENST00000515174 NKX3-2P78367 333 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 NCBP1Q09161 790 aaKnown RBP11.01□□□□□ -0.65
SNF8-214ENST00000515174 GJC2Q5T442 439 aaPredicted RBP11.01□□□□□ -0.65
SNF8-214ENST00000515174 MTHFD1LQ6UB35 978 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 MPZL3Q6UWV2 235 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 H2AFVQ71UI9 128 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 ZNF572Q7Z3I7 529 aaPredicted RBP11.01□□□□□ -0.65
SNF8-214ENST00000515174 ZNF410Q86VK4 478 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 WDR49Q8IV35 697 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 OR6J1Q8NGC5 347 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 LMBR1Q8WVP7 490 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 TRIB2Q92519 343 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 UBXN4Q92575 508 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 RABGGTAQ92696 567 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 ZBTB45Q96K62 511 aaPredicted RBP11.01□□□□□ -0.65
SNF8-214ENST00000515174 KREMEN1Q96MU8 473 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 AGPAT1Q99943 283 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.01□□□□□ -0.65
SNF8-214ENST00000515174 CARD6Q9BX69 1037 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 ISCUQ9H1K1 167 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 PRO3102Q9H379 93 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 CPSF3Q9UKF6 684 aaKnown RBP11.01□□□□□ -0.65
SNF8-214ENST00000515174 CNTN6Q9UQ52 1028 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 KAT6AQ92794 2004 aa11.01□□□□□ -0.65
SNF8-214ENST00000515174 C11orf97A0A1B0GVM6 126 aaPredicted RBP11□□□□□ -0.65
SNF8-214ENST00000515174 HAS3O00219 553 aa11□□□□□ -0.65
SNF8-214ENST00000515174 CES2O00748 559 aa11□□□□□ -0.65
SNF8-214ENST00000515174 ADCY6O43306 1168 aa11□□□□□ -0.65
SNF8-214ENST00000515174 B4GALT4O60513 344 aa11□□□□□ -0.65
SNF8-214ENST00000515174 KPNA6O60684 536 aa11□□□□□ -0.65
SNF8-214ENST00000515174 SGPL1O95470 568 aa11□□□□□ -0.65
SNF8-214ENST00000515174 EDN1P05305 212 aa11□□□□□ -0.65
SNF8-214ENST00000515174 TMEM253P0C7T8 217 aa11□□□□□ -0.65
SNF8-214ENST00000515174 SRGAP2CP0DJJ0 459 aa11□□□□□ -0.65
SNF8-214ENST00000515174 TNFAIP3P21580 790 aa11□□□□□ -0.65
SNF8-214ENST00000515174 CYP2C19P33261 490 aa11□□□□□ -0.65
SNF8-214ENST00000515174 FLT3LGP49771 235 aa11□□□□□ -0.65
SNF8-214ENST00000515174 MNX1P50219 401 aaPredicted RBP11□□□□□ -0.65
SNF8-214ENST00000515174 BPIFB4P59827 614 aa11□□□□□ -0.65
SNF8-214ENST00000515174 ARID5AQ03989 594 aa11□□□□□ -0.65
SNF8-214ENST00000515174 MBTD1Q05BQ5 628 aa11□□□□□ -0.65
SNF8-214ENST00000515174 WDR44Q5JSH3 913 aa11□□□□□ -0.65
SNF8-214ENST00000515174 UBE2Q1Q7Z7E8 422 aa11□□□□□ -0.65
SNF8-214ENST00000515174 SLFN11Q7Z7L1 901 aa11□□□□□ -0.65
SNF8-214ENST00000515174 ZNF677Q86XU0 584 aa11□□□□□ -0.65
SNF8-214ENST00000515174 RHPN2Q8IUC4 686 aa11□□□□□ -0.65
SNF8-214ENST00000515174 ARHGEF19Q8IW93 802 aa11□□□□□ -0.65
SNF8-214ENST00000515174 LRRC71Q8N4P6 559 aa11□□□□□ -0.65
SNF8-214ENST00000515174 GPR161Q8N6U8 529 aaKnown RBP11□□□□□ -0.65
SNF8-214ENST00000515174 TAS1R2Q8TE23 839 aa11□□□□□ -0.65
SNF8-214ENST00000515174 LENG1Q96BZ8 264 aaPredicted RBP11□□□□□ -0.65
SNF8-214ENST00000515174 POP1Q99575 1024 aaKnown RBP11□□□□□ -0.65
SNF8-214ENST00000515174 IFT122Q9HBG6 1241 aa11□□□□□ -0.65
SNF8-214ENST00000515174 RBAKQ9NYW8 714 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms