RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 PDCL2Q8N4E4 241 aa14.18□□□□□ -0.14
DEPDC1B-206ENST00000512452 ANKRD13CQ8N6S4 541 aa14.18□□□□□ -0.14
DEPDC1B-206ENST00000512452 PSPC1Q8WXF1 523 aaKnown RBP14.18□□□□□ -0.14
DEPDC1B-206ENST00000512452 RABGGTAQ92696 567 aa14.18□□□□□ -0.14
DEPDC1B-206ENST00000512452 BADQ92934 168 aa14.18□□□□□ -0.14
DEPDC1B-206ENST00000512452 TMEM143Q96AN5 459 aa14.18□□□□□ -0.14
DEPDC1B-206ENST00000512452 TIFAQ96CG3 184 aa14.18□□□□□ -0.14
DEPDC1B-206ENST00000512452 CALR3Q96L12 384 aaKnown RBP14.18□□□□□ -0.14
DEPDC1B-206ENST00000512452 TMEM117Q9H0C3 514 aa14.18□□□□□ -0.14
DEPDC1B-206ENST00000512452 SLC5A4Q9NY91 659 aa14.18□□□□□ -0.14
DEPDC1B-206ENST00000512452 ADAMTS1Q9UHI8 967 aa14.18□□□□□ -0.14
DEPDC1B-206ENST00000512452 SAR1BQ9Y6B6 198 aa14.18□□□□□ -0.14
DEPDC1B-206ENST00000512452 ZDBF2Q9HCK1 2354 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 SLC15A5A6NIM6 579 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 LRRIQ4A6NIV6 560 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 TUBBP07437 444 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 GCLMP48507 274 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 CHMP4BP1P59074 171 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 DLG4P78352 724 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 ARID5AQ03989 594 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 POU5F1BQ06416 359 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 ARHGAP1Q07960 439 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 TFDP1Q14186 410 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 ADGRE1Q14246 886 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 PLCB4Q15147 1175 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 HSDL1Q3SXM5 330 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 TAPT1Q6NXT6 567 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 PLEKHH3Q7Z736 793 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 ZBTB8OSQ8IWT0 167 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 GPR161Q8N6U8 529 aaKnown RBP14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 PLEKHO2Q8TD55 490 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 UBE2Q2Q8WVN8 375 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 TSC1Q92574 1164 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 SYT11Q9BT88 431 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 SENP6Q9GZR1 1112 aaPredicted RBP14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 ERAP1Q9NZ08 941 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 NAGPAQ9UK23 515 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 AJAP1Q9UKB5 411 aaPredicted RBP14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 COL1A2P08123 1366 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 MYO9BQ13459 2157 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 LTBP2Q14767 1821 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 DOCK3Q8IZD9 2030 aa14.17□□□□□ -0.14
DEPDC1B-206ENST00000512452 PLXNA1Q9UIW2 1896 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 A0A0B4J269 797 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 MACROD2A1Z1Q3 448 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 CTAGE15A4D2H0 777 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 GOLGA8IPA6NC78 632 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 GOLGA8JA6NMD2 632 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 LRRIQ3A6PVS8 624 aaPredicted RBP14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 CTAGE8P0CG41 777 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 TCP1P17987 556 aaKnown RBP14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 AP3M2P53677 418 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 MFAP3P55082 362 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 CAPSQ13938 189 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 ELF2Q15723 593 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 PHLDB3Q6NSJ2 640 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 ALKBH5Q6P6C2 394 aaKnown RBP14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 C15orf39Q6ZRI6 1047 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 GPR142Q7Z601 462 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 CTAGE6Q86UF2 777 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 CTAGE4Q8IX94 777 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 FBXL13Q8NEE6 735 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 PPTC7Q8NI37 304 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 COL26A1Q96A83 441 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 SAAL1Q96ER3 474 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 MRPL4Q9BYD3 311 aaKnown RBP14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 NFKBIZQ9BYH8 718 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 GPR88Q9GZN0 384 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 ARGLU1Q9NWB6 273 aaPredicted RBP14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 AGO2Q9UKV8 859 aaKnown RBP14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 PCDHGC5Q9Y5F6 944 aa14.16□□□□□ -0.14
DEPDC1B-206ENST00000512452 ZBTB42B2RXF5 422 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 MAGEB2O15479 319 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 ATP1A1P05023 1023 aaKnown RBP14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 H2AFZP0C0S5 128 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 HOXD8P13378 290 aaPredicted RBP14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 GCNT1Q02742 428 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 ITIH3Q06033 890 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 SURF1Q15526 300 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 KIAA0753Q2KHM9 967 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 ERCC6LQ2NKX8 1250 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 GJB7Q6PEY0 223 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 H2AFVQ71UI9 128 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 ZNF572Q7Z3I7 529 aaPredicted RBP14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 SLC30A5Q8TAD4 765 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 PRPF31Q8WWY3 499 aaKnown RBP14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 DHX38Q92620 1227 aaKnown RBP14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 NT5C1BQ96P26 610 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 PHOX2BQ99453 314 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 FAM213AQ9BRX8 229 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 KATNBL1Q9H079 304 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 CCDC113Q9H0I3 377 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 UBE2TQ9NPD8 197 aaPredicted RBP14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 RNF14Q9UBS8 474 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 SNX12Q9UMY4 172 aa14.15□□□□□ -0.14
DEPDC1B-206ENST00000512452 HYOU1Q9Y4L1 999 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms