RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 CHN2P52757 468 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 RAB15P59190 212 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 INAQ16352 499 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 FOXR2Q6PJQ5 311 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 H2AFVQ71UI9 128 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 IQCF2Q8IXL9 164 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 SRRM1Q8IYB3 904 aaKnown RBP10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 GUF1Q8N442 669 aaKnown RBP10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 SCAIQ8N9R8 606 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 PLEKHO2Q8TD55 490 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 C18orf8Q96DM3 657 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 VPS50Q96JG6 964 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 STRBPQ96SI9 672 aaKnown RBP10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 GANQ9H2C0 597 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 EPB41L4AQ9HCS5 686 aaPredicted RBP10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 SLCO1B3Q9NPD5 702 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 TRAF3IP3Q9Y228 551 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 SSX2IPQ9Y2D8 614 aa10.66□□□□□ -0.7
PDGFRA-207ENST00000509092 BUD23O43709 281 aaKnown RBP10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 ADCY3O60266 1144 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 PLCG2P16885 1265 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 NFKBIAP25963 317 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 AMPD3Q01432 767 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 SPARCL1Q14515 664 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 PDK4Q16654 411 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 TMEM266Q2M3C6 531 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 NET1Q7Z628 596 aaPredicted RBP10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 RASSF3Q86WH2 238 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 SFR1Q86XK3 245 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 FAM186BQ8IYM0 893 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 IFNL3Q8IZI9 196 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 KCNH5Q8NCM2 988 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 CABLES1Q8TDN4 633 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 SPOCK2Q92563 424 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 CASP10Q92851 521 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 ITPKCQ96DU7 683 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 ZNF594Q96JF6 807 aaPredicted RBP10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 SRPK1Q96SB4 655 aaKnown RBP10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 TSG101Q99816 390 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 GPAMQ9HCL2 828 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 UBN1Q9NPG3 1134 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 ZNHIT2Q9UHR6 403 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 DLEC1Q9Y238 1755 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 FLT1P17948 1338 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 PHLPP1O60346 1717 aa10.65□□□□□ -0.7
PDGFRA-207ENST00000509092 ARHGAP10A1A4S6 786 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 CCDC160A6NGH7 325 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 ATP5J2-PTCD1G3V325 749 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 NDUFB5O43674 189 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 PTCD1O75127 700 aaKnown RBP10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 COL6A2P12110 1019 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 XIAPP98170 497 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 PLCB3Q01970 1234 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 TNIP1Q15025 636 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 CCDC153Q494R4 210 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 SYCP2LQ5T4T6 812 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 FYB2Q5VWT5 728 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 IRF2BP2Q7Z5L9 587 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 ADGRG6Q86SQ4 1221 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 SAPCD2Q86UD0 394 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 PROM2Q8N271 834 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 SPATA5Q8NB90 893 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 HPS3Q969F9 1004 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 CGREF1Q99674 301 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 NRDE2Q9H7Z3 1164 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 STX8Q9UNK0 236 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 COL4A3BPQ9Y5P4 624 aa10.65□□□□□ -0.71
PDGFRA-207ENST00000509092 ZNF532Q9HCE3 1301 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 RREB1Q92766 1687 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 ADAMTS7Q9UKP4 1686 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 FBP2O00757 339 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 MAGEC1O60732 1142 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 CDH16O75309 829 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 PGM3O95394 542 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 HOXA7P31268 230 aaPredicted RBP10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 CA8P35219 290 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 PGM1P36871 562 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 PPIDQ08752 370 aaKnown RBP10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 PDK3Q15120 406 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 TXNRD1Q16881 649 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 TRMT5Q32P41 509 aaKnown RBP10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 C1orf141Q5JVX7 400 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 NEPROQ6NW34 567 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 UGT2A3Q6UWM9 527 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 RAPH1Q70E73 1250 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 ZFRQ96KR1 1074 aaKnown RBP10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 EURLQ9NYK6 297 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 TAS2R1Q9NYW7 299 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 FAF1Q9UNN5 650 aaPredicted RBP10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 NUMBLQ9Y6R0 609 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 MYH11P35749 1972 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 ZMYM2Q9UBW7 1377 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 PLEKHA8P1O95397 391 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 TTC4O95801 387 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 ZBED1O96006 694 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 TFAP2AP05549 437 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 S100A1P23297 94 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 COG7P83436 770 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 PFKPQ01813 784 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 KRT72Q14CN4 511 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms