RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, human

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-223	ENST00000508608	CCDC63	Q8NA47	563 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	SEMA4D	Q92854	862 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	PLCD4	Q9BRC7	762 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	AVEN	Q9NQS1	362 aa	Predicted RBP	13.95	□□□□□ -0.18
CAST-223	ENST00000508608	TPX2	Q9ULW0	747 aa	Known RBP	13.95	□□□□□ -0.18
CAST-223	ENST00000508608	UBIAD1	Q9Y5Z9	338 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	JAK3	P52333	1124 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	ENPEP	Q07075	957 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	MTMR1	Q13613	665 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	ZYX	Q15942	572 aa	Known RBP	13.95	□□□□□ -0.18
CAST-223	ENST00000508608	UBAP2	Q5T6F2	1119 aa	Known RBP	13.95	□□□□□ -0.18
CAST-223	ENST00000508608	NSMF	Q6X4W1	530 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	EXOC3L1	Q86VI1	746 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	GBP7	Q8N8V2	638 aa	Predicted RBP	13.95	□□□□□ -0.18
CAST-223	ENST00000508608	ZSWIM2	Q8NEG5	633 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	FLAD1	Q8NFF5	587 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	ARHGEF2	Q92974	986 aa	Known RBP	13.95	□□□□□ -0.18
CAST-223	ENST00000508608	CCDC127	Q96BQ5	260 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	SCLT1	Q96NL6	688 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	RAB20	Q9NX57	234 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	ANAPC7	Q9UJX3	599 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	TBX20	Q9UMR3	447 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	BRWD3	Q6RI45	1802 aa		13.95	□□□□□ -0.18
CAST-223	ENST00000508608	SPDYE2B	A6NHP3	402 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	SNX3	O60493	162 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	ASTN2	O75129	1339 aa	Predicted RBP	13.94	□□□□□ -0.18
CAST-223	ENST00000508608	SPDYE6	P0CI01	402 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	ELF3	P78545	371 aa	Predicted RBP	13.94	□□□□□ -0.18
CAST-223	ENST00000508608	GHRHR	Q02643	423 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	DMP1	Q13316	513 aa	Predicted RBP	13.94	□□□□□ -0.18
CAST-223	ENST00000508608	LONRF1	Q17RB8	773 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	RHBDF2	Q6PJF5	856 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	SUPT20H	Q8NEM7	779 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	GIMAP7	Q8NHV1	300 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	C1orf54	Q8WWF1	131 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	DDX1	Q92499	740 aa	Known RBP	13.94	□□□□□ -0.18
CAST-223	ENST00000508608	ACP6	Q9NPH0	428 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	ANKEF1	Q9NU02	776 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	ARID2	Q68CP9	1835 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
CAST-223	ENST00000508608	SUN1	O94901	812 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	ACSL3	O95573	720 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	OAS1	P00973	400 aa	Known RBP	13.94	□□□□□ -0.18
CAST-223	ENST00000508608	ATF2	P15336	505 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	SFN	P31947	248 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	PTGER2	P43116	358 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	PSMC5	P62195	406 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	GCNT1	Q02742	428 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	CENPC	Q03188	943 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	FAM102B	Q5T8I3	360 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	ZNF677	Q86XU0	584 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	CPNE8	Q86YQ8	564 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	BBOF1	Q8ND07	529 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	TRAIP	Q9BWF2	469 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.94	□□□□□ -0.18	7e-7	■■■■■ 104.8
CAST-223	ENST00000508608	FBXO28	Q9NVF7	368 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	USP15	Q9Y4E8	981 aa	Predicted RBP	13.94	□□□□□ -0.18
CAST-223	ENST00000508608	WDR81	Q562E7	1941 aa		13.94	□□□□□ -0.18
CAST-223	ENST00000508608	TMEM120B	A0PK00	339 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	TCEA3	O75764	348 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	TTC4	O95801	387 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	KRT5	P13647	590 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	CNGA1	P29973	690 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	NF2	P35240	595 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	CAP2	P40123	477 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	MKRN3	Q13064	507 aa	Known RBP	13.93	□□□□□ -0.18
CAST-223	ENST00000508608	CCDC38	Q502W7	563 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.93	□□□□□ -0.18
CAST-223	ENST00000508608	CEP128	Q6ZU80	1094 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	CEP57	Q86XR8	500 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	IL31RA	Q8NI17	732 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	SAAL1	Q96ER3	474 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	MFSD14A	Q96MC6	490 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	AGBL1	Q96MI9	1066 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	DDX23	Q9BUQ8	820 aa	Known RBP	13.93	□□□□□ -0.18
CAST-223	ENST00000508608	AAAS	Q9NRG9	546 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	MAP3K20	Q9NYL2	800 aa	Known RBP	13.93	□□□□□ -0.18
CAST-223	ENST00000508608	COL20A1	Q9P218	1284 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	WDR64	B1ANS9	1081 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608		O00370	1275 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	THAP12	O43422	761 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	TBC1D12	O60347	775 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	SORBS3	O60504	671 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	ATP6V1G2	O95670	118 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	ADSS	P30520	456 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	XKR9	Q5GH70	373 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	SAMD3	Q8N6K7	520 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	TMEM161B	Q8NDZ6	487 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	TAS1R2	Q8TE23	839 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	GPRC5C	Q9NQ84	441 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	ZNF70	Q9UC06	446 aa	Predicted RBP	13.93	□□□□□ -0.18
CAST-223	ENST00000508608	MCM8	Q9UJA3	840 aa		13.93	□□□□□ -0.18
CAST-223	ENST00000508608	CLRN2	A0PK11	232 aa		13.92	□□□□□ -0.18
CAST-223	ENST00000508608	KRT76	Q01546	638 aa		13.92	□□□□□ -0.18
CAST-223	ENST00000508608	CYP24A1	Q07973	514 aa		13.92	□□□□□ -0.18
CAST-223	ENST00000508608	PTP4A2	Q12974	167 aa		13.92	□□□□□ -0.18
CAST-223	ENST00000508608	RIPK1	Q13546	671 aa		13.92	□□□□□ -0.18
CAST-223	ENST00000508608	SNX1	Q13596	522 aa		13.92	□□□□□ -0.18
CAST-223	ENST00000508608	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
CAST-223	ENST00000508608	GPATCH11	Q8N954	259 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms