RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 GAGE12HA6NDE8 117 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 DRGXA6NNA5 263 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 RNASET2O00584 256 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 LPXNO60711 386 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 PPFIA4O75335 1185 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 IL2RBP14784 551 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 ALDH1A3P47895 512 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 CHN2P52757 468 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 TIGD2Q4W5G0 525 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 RRP12Q5JTH9 1297 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 LY6G5CQ5SRR4 150 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 KCNV1Q6PIU1 500 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 MRGPRGQ86SM5 289 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 PLXDC1Q8IUK5 500 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 C1orf162Q8NEQ5 155 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 SSH1Q8WYL5 1049 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 CEP89Q96ST8 783 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 MRI1Q9BV20 369 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 SENP6Q9GZR1 1112 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 DKK2Q9UBU2 259 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 AJAP1Q9UKB5 411 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 DNM3Q9UQ16 869 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 A0A087X1B8 175 aa7.17□□□□□ -1.26
TOPBP1-206ENST00000508524 TMEM200CA6NKL6 621 aa7.17□□□□□ -1.26
TOPBP1-206ENST00000508524 FAM171A2A8MVW0 826 aa7.17□□□□□ -1.26
TOPBP1-206ENST00000508524 SUV39H1O43463 412 aa7.17□□□□□ -1.26
TOPBP1-206ENST00000508524 CDK11BP21127 795 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-206ENST00000508524 PCSK1P29120 753 aa7.17□□□□□ -1.26
TOPBP1-206ENST00000508524 MTMR1Q13613 665 aa7.17□□□□□ -1.26
TOPBP1-206ENST00000508524 BEAN1Q3B7T3 259 aa7.17□□□□□ -1.26
TOPBP1-206ENST00000508524 VRK3Q8IV63 474 aa7.17□□□□□ -1.26
TOPBP1-206ENST00000508524 CASKIN2Q8WXE0 1202 aa7.17□□□□□ -1.26
TOPBP1-206ENST00000508524 MOCS1Q9NZB8 636 aa7.17□□□□□ -1.26
TOPBP1-206ENST00000508524 TUBD1Q9UJT1 453 aa7.17□□□□□ -1.26
TOPBP1-206ENST00000508524 TRHDEQ9UKU6 1024 aa7.17□□□□□ -1.26
TOPBP1-206ENST00000508524 MARCH11A6NNE9 402 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 FOXN1O15353 648 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 MT-CO1P00395 513 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 AMY1AP04745 511 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 RAP2AP10114 183 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 RAP2BP61225 183 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 CLUL1Q15846 466 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 SYDE2Q5VT97 1194 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 AGAP9Q5VTM2 703 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 OTUD7BQ6GQQ9 843 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 PGM2L1Q6PCE3 622 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 DRC7Q8IY82 874 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 JADE3Q92613 823 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 TTPALQ9BTX7 342 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 SLC23A1Q9UHI7 598 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 USP15Q9Y4E8 981 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 ACTL7AQ9Y615 435 aa7.16□□□□□ -1.26
TOPBP1-206ENST00000508524 GRID2IPA4D2P6 1211 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 TMEM191CA6NGB0 347 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 NDUFA10O95299 355 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 ATP5JP18859 108 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 WASP42768 502 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 GUCY2FP51841 1108 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 PTPAQ15257 358 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 ABCB5Q2M3G0 1257 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 CRB2Q5IJ48 1285 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 LAIR1Q6GTX8 287 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 RHOT2Q8IXI1 618 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 ZGPATQ8N5A5 531 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 PPM1NQ8N819 430 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 PRPF38AQ8NAV1 312 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 NRG4Q8WWG1 115 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 DPF2Q92785 391 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 CYFIP2Q96F07 1278 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 PHACTR3Q96KR7 559 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 AGAP2Q99490 1192 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 TMEM140Q9NV12 185 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 FAM30AQ9NZY2 134 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 DMRT1Q9Y5R6 373 aa7.15□□□□□ -1.26
TOPBP1-206ENST00000508524 FZD9O00144 591 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 PCDHGA12O60330 932 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 GPR32O75388 356 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 SPATA31D3P0C874 917 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 C5AR1P21730 350 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 BMPR1AP36894 532 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 ATP8B2P98198 1209 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 PURAQ00577 322 aaKnown RBP7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 MTM1Q13496 603 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 SPATA31D4Q6ZUB0 917 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 SEM1Q6ZVN7 128 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 MED25Q71SY5 747 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 ARHGEF19Q8IW93 802 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 CCHCR1Q8TD31 782 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 FAXDC2Q96IV6 333 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 ADAM2Q99965 735 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 MYOCQ99972 504 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 CCDC8Q9H0W5 538 aaPredicted RBP7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 MKS1Q9NXB0 559 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 PCDHGA9Q9Y5G4 932 aaKnown RBP7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 PCDHGA8Q9Y5G5 932 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 PCDHGA7Q9Y5G6 932 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 PCDHGA6Q9Y5G7 932 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 PCDHGA3Q9Y5H0 932 aa7.14□□□□□ -1.27
TOPBP1-206ENST00000508524 GABRDO14764 452 aa7.13□□□□□ -1.27
TOPBP1-206ENST00000508524 RAMP2O60895 175 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms