RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 HNRNPA1P09651 372 aaKnown RBP eCLIP15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 PDCP20941 246 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 HOXA9P31269 272 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 NHLH1Q02575 133 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 TDGQ13569 410 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 ZNF568Q3ZCX4 644 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 NT5DC1Q5TFE4 455 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 LIN9Q5TKA1 542 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 FAM171A1Q5VUB5 890 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 EEF1DP3Q658K8 133 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 LARP1BQ659C4 914 aaKnown RBP15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 LILRA6Q6PI73 481 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 BRAPQ7Z569 592 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 SYT2Q8N9I0 419 aaPredicted RBP15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 KCNN1Q92952 543 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 ACO2Q99798 780 aaKnown RBP15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 TCHPQ9BT92 498 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 KIFC3Q9BVG8 833 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 PRKD2Q9BZL6 878 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 CDH22Q9UJ99 828 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 GDAQ9Y2T3 454 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 CLUHO75153 1309 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 MYO10Q9HD67 2058 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 DENND4AQ7Z401 1863 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 TTLL13PA6NNM8 815 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 ZMYND10O75800 440 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 B3GAT3O94766 335 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 KIF4AO95239 1232 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 POU2F2P09086 479 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 PLS3P13797 630 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 AVPR2P30518 371 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 NAB2Q15742 525 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 PSMD5Q16401 504 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 KYAT1Q16773 422 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 UVSSAQ2YD98 709 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 XKR4Q5GH76 650 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 MPZL3Q6UWV2 235 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 ZPBP2Q6X784 338 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 PALB2Q86YC2 1186 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 CALML4Q96GE6 196 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 TBC1D32Q96NH3 1257 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 ACAP3Q96P50 834 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 PPP1R10Q96QC0 940 aaKnown RBP15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 MMTAG2Q9BU76 263 aaKnown RBP15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 PTPRHQ9HD43 1115 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 EPS15L1Q9UBC2 864 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 FBXW11Q9UKB1 542 aa15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 MTCL1Q9Y4B5 1905 aaKnown RBP15.82■□□□□ 0.12
HMGCS1-203ENST00000507004 VWA3AA6NCI4 1184 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 XYLBO75191 536 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 TOM1L1O75674 476 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 FGFR3P22607 806 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 GBP2P32456 591 aaPredicted RBP15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 RPL9P32969 192 aaKnown RBP15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 UBA7P41226 1012 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 IL17AQ16552 155 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 RTP2Q5QGT7 225 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 KANK3Q6NY19 840 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 ANKS3Q6ZW76 656 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 CEP57Q86XR8 500 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 DAW1Q8N136 415 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 LNX1Q8TBB1 728 aaPredicted RBP15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 RUSC1Q9BVN2 902 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 CDT1Q9H211 546 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 ODF2LQ9ULJ1 636 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 DUSP12Q9UNI6 340 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 BACE2Q9Y5Z0 518 aa15.81■□□□□ 0.12
HMGCS1-203ENST00000507004 SMIM28A0A1B0GU29 152 aa15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 PP2D1A8MPX8 630 aa15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 F8W810 466 aa15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 PLA2G4BP0C869 781 aa15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 KCNE1P15382 129 aa15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 PROZP22891 400 aa15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 CDC25AP30304 524 aa15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 CLCN5P51795 746 aa15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 MAPK7Q13164 816 aa15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 RAB33AQ14088 237 aa15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 ZRSR1Q15695 479 aaKnown RBP15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 ZNF707Q96C28 371 aaPredicted RBP15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 TSPAN18Q96SJ8 248 aa15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 PAAF1Q9BRP4 392 aa15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 MFSD1Q9H3U5 465 aa15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 KCNK12Q9HB15 430 aa15.8■□□□□ 0.12
HMGCS1-203ENST00000507004 SYN3O14994 580 aa15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 RFPL2O75678 378 aa15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 EDN1P05305 212 aa15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 ASGR2P07307 311 aa15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 LONP1P36776 959 aaKnown RBP15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 SLC12A3P55017 1021 aa15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 UPP1Q16831 310 aa15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 TMEM119Q4V9L6 283 aa15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 PPM1LQ5SGD2 360 aa15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 PRSS55Q6UWB4 352 aaPredicted RBP15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 ALKAL1Q6UXT8 129 aa15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 B3GALT6Q96L58 329 aa15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 PNMA5Q96PV4 448 aa15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 CLSTN3Q9BQT9 956 aa15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 TARS2Q9BW92 718 aaKnown RBP15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 PLEKHA5Q9HAU0 1116 aa15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 CNTN3Q9P232 1028 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms