RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 DENND5AQ6IQ26 1287 aa4.83□□□□□ -1.64
RFC1-208ENST00000504849 KCNT2Q6UVM3 1135 aa4.83□□□□□ -1.64
RFC1-208ENST00000504849 CLEC17AQ6ZS10 378 aa4.83□□□□□ -1.64
RFC1-208ENST00000504849 PPIL6Q8IXY8 311 aa4.83□□□□□ -1.64
RFC1-208ENST00000504849 VPS37AQ8NEZ2 397 aa4.83□□□□□ -1.64
RFC1-208ENST00000504849 DIO2Q92813 273 aa4.83□□□□□ -1.64
RFC1-208ENST00000504849 COPS5Q92905 334 aa4.83□□□□□ -1.64
RFC1-208ENST00000504849 PHF20Q9BVI0 1012 aa4.83□□□□□ -1.64
RFC1-208ENST00000504849 TMX4Q9H1E5 349 aaPredicted RBP4.83□□□□□ -1.64
RFC1-208ENST00000504849 SLC12A5Q9H2X9 1139 aa4.83□□□□□ -1.64
RFC1-208ENST00000504849 AS3MTQ9HBK9 375 aa4.83□□□□□ -1.64
RFC1-208ENST00000504849 IPPQ9Y573 584 aa4.83□□□□□ -1.64
RFC1-208ENST00000504849 CLTCL1P53675 1640 aa4.83□□□□□ -1.64
RFC1-208ENST00000504849 NRXN1Q9ULB1 1477 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 ARHGAP31Q2M1Z3 1444 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 ANKRD36BQ8N2N9 1353 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 EVC2Q86UK5 1308 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 PTPDC1A2A3K4 754 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 CFAP69A5D8W1 941 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 MEFVO15553 781 aaPredicted RBP4.82□□□□□ -1.64
RFC1-208ENST00000504849 SLC26A4O43511 780 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 XPOTO43592 962 aaKnown RBP4.82□□□□□ -1.64
RFC1-208ENST00000504849 PCDHGA12O60330 932 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 PIP5K1CO60331 668 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 ZKSCAN1P17029 563 aaPredicted RBP4.82□□□□□ -1.64
RFC1-208ENST00000504849 GRK2P25098 689 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 LTBRP36941 435 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 ALDH5A1P51649 535 aaPredicted RBP4.82□□□□□ -1.64
RFC1-208ENST00000504849 BTKQ06187 659 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 CYP4F3Q08477 520 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 SCRN1Q12765 414 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 BIRC3Q13489 604 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 PPP2R5DQ14738 602 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 KIZQ2M2Z5 673 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 CR1LQ2VPA4 569 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 AGBL4Q5VU57 503 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 BROXQ5VW32 411 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 LBX2Q6XYB7 198 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 OTOP1Q7RTM1 612 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 RASSF3Q86WH2 238 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 CHD1LQ86WJ1 897 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 MYLK4Q86YV6 388 aaPredicted RBP4.82□□□□□ -1.64
RFC1-208ENST00000504849 KLHL36Q8N4N3 616 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 NKAPQ8N5F7 415 aaKnown RBP4.82□□□□□ -1.64
RFC1-208ENST00000504849 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.82□□□□□ -1.64
RFC1-208ENST00000504849 PCDH19Q8TAB3 1148 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 INO80BQ9C086 356 aaPredicted RBP4.82□□□□□ -1.64
RFC1-208ENST00000504849 COQ6Q9Y2Z9 468 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 RRP7AQ9Y3A4 280 aaKnown RBP4.82□□□□□ -1.64
RFC1-208ENST00000504849 PCDHGA9Q9Y5G4 932 aaKnown RBP4.82□□□□□ -1.64
RFC1-208ENST00000504849 PCDHGA8Q9Y5G5 932 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 PCDHGA7Q9Y5G6 932 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 PCDHGA6Q9Y5G7 932 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 PCDHGA3Q9Y5H0 932 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 PCDHGA2Q9Y5H1 932 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 DDX49Q9Y6V7 483 aaKnown RBP4.82□□□□□ -1.64
RFC1-208ENST00000504849 MORC2Q9Y6X9 1032 aaPredicted RBP4.82□□□□□ -1.64
RFC1-208ENST00000504849 DEPDC5O75140 1603 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 ABCA6Q8N139 1617 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 ADGRB2O60241 1585 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 CFAP74Q9C0B2 1584 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 ZFYVE16Q7Z3T8 1539 aa4.82□□□□□ -1.64
RFC1-208ENST00000504849 FANCAO15360 1455 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 SETD1AO15047 1707 aaKnown RBP4.81□□□□□ -1.64
RFC1-208ENST00000504849 RPGRIP1LQ68CZ1 1315 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 SHPRHQ149N8 1683 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 PRRT4C9JH25 899 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 TPP1O14773 563 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 AP1G1O43747 822 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 NBNO60934 754 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 ZRANB2O95218 330 aaKnown RBP eCLIP4.81□□□□□ -1.64
RFC1-208ENST00000504849 MBD3O95983 291 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 SOD2P04179 222 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 ERBB2P04626 1255 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 FAM163BP0C2L3 166 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 MTHFSP49914 203 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 KRTAP10-6P60371 365 aaPredicted RBP4.81□□□□□ -1.64
RFC1-208ENST00000504849 FAM193AP78312 1265 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 KCNAB2Q13303 367 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 PRR16Q569H4 304 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 ATAT1Q5SQI0 421 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 IQCEQ6IPM2 695 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 XRRA1Q6P2D8 792 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 CCDC174Q6PII3 467 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 MMS22LQ6ZRQ5 1243 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 Q6ZSN1 163 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 OVCH1Q7RTY7 1134 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 IL17DQ8TAD2 202 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 NPLOC4Q8TAT6 608 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 NTN5Q8WTR8 489 aaPredicted RBP4.81□□□□□ -1.64
RFC1-208ENST00000504849 SYAP1Q96A49 352 aaPredicted RBP4.81□□□□□ -1.64
RFC1-208ENST00000504849 PGBD4Q96DM1 585 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 TEKT5Q96M29 485 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 ZDHHC15Q96MV8 337 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 CDC5LQ99459 802 aaKnown RBP4.81□□□□□ -1.64
RFC1-208ENST00000504849 NAA15Q9BXJ9 866 aaKnown RBP4.81□□□□□ -1.64
RFC1-208ENST00000504849 MMRN2Q9H8L6 949 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 L2HGDHQ9H9P8 463 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 TRMT13Q9NUP7 481 aaKnown RBP4.81□□□□□ -1.64
RFC1-208ENST00000504849 OXSMQ9NWU1 459 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms